Factsheet for Bra016017.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96450	Canola	plastid	96.2	95.97
AT1G73110.1	Thale cress	plastid	88.12	85.88
VIT_09s0018g01270.t01	Wine grape	extracellular	54.39	79.51
PGSC0003DMT400036879	Potato	extracellular	53.21	76.19
HORVU0Hr1G005570.3	Barley	cytosol	39.67	73.57
GSMUA_Achr10P...	Banana	plastid	69.12	69.29
KRH23699	Soybean	plastid	70.07	68.93
Os04t0658300-01	Rice	plastid	71.02	67.8
Solyc03g117850.2.1	Tomato	plastid	71.02	67.65
OQU82488	Sorghum	plastid	68.65	66.74
TraesCS2D01G501700.1	Wheat	plastid	68.41	64.86
TraesCS2B01G529300.1	Wheat	plastid	68.17	64.64
TraesCS2A01G501200.1	Wheat	plastid	67.7	64.33
Zm00001d001995_P003	Maize	plastid	68.17	62.39
Bra017055.1-P	Field mustard	plastid	42.28	40.18
Bra005019.1-P	Field mustard	plastid	42.28	37.47
Bra000144.1-P	Field mustard	plastid	40.86	36.21

Protein Annotations

Gene3D:1.10.8.1070	Gene3D:3.40.50.300	MapMan:35.1	InterPro:ATPase_AAA_core	EnsemblPlantsGene:Bra016017	EnsemblPlants:Bra016017.1
EnsemblPlants:Bra016017.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0016020	UniProt:M4DHP0	InterPro:P-loop_NTPase	PFAM:PF00004	PANTHER:PTHR32429
PANTHER:PTHR32429:SF11	SUPFAM:SSF52540	UniParc:UPI0002541CBC	SEG:seg	:	:

Description

AT1G73110 (E=7e-201) | ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putative

Coordinates

chrA07:-:19822631..19824852

Molecular Weight (calculated)

47503.9 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.420

Length

421 amino acids

Sequence
(BLAST)

001: MALTNISLRF KFPPLQSSTF NHTCRKPFSI ACSKAGDDGE KGAVDGGEKP RKLSEQSSWE VKDSEGKDYL YRLGAESENM NIAVGARAGM IDDVFIGDFL
101: GKDSDIVFDY RQKATRSFEH LQGDYYIAPT FMDKVAVHIV KNYLASSLNI KIPLILGIWG GKGQGKTFQT ELIFKTMGVE PVIMSAGELE SDRAGEPGRL
201: IRDRYRTASQ VIQNQGKMSV LMINDIDAGL GRFGETQMTV NNQIVVGTLM NLADNPTRVS VGQDWRDADT VNRVPLIVTG NDFSRLYAPL IREGRMEKFY
301: WQPTREDIVN IVSRMYEKDG ISRKDVVSIV DQFPNQALDF YGALRSRTYD RSILKWVDEV GGIETLEKTL LRRKKTKEVP QFIPPEQTVE ALLESGYSLI
401: KEQKLINETK LSKEYMKNID D

Best Arabidopsis Sequence Match ( AT1G73110.1 )
(BLAST)

001: MALANISLRF KFPPLQSSSS SSSSFNATLI NTRKLSSIVC SKPSSNDGGK VANDDGGAKP RKKLSEQSSW EVKDSEGKDY LYRLGAESDN VNIAVGARSG
101: MIDDVFIGDF LGKDSDIVFD YRQKATRSFE HLQGDYYIAP SFLDKVAVHI VKNYLAPSLN IKIPLILGIW GGKGQGKTFQ TELIFKTMGV EPVIMSAGEL
201: ESDRAGEPGR LIRDRYRTAS QVIQNQGKMS VLMINDIDAG LGRFGETQMT VNNQIVVGTL MNLADNPTRV SVGQEWREAD MVNRVPLIVT GNDFSTLYAP
301: LIREGRMEKF YWQPTREDIV NIVSRMYEKD GISRKDVISI VDKFPNQALD FYGALRSRTY DRSILKWVDE AGGMETLGKV LLRRKKTQEV PQFTAPEQTV
401: EALLESGYSL INEQKLIMET KLSKEYMKNM DD

Arabidopsis Description

At1g73110/F3N23_39 [Source:UniProtKB/TrEMBL;Acc:Q9AST9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.