CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi

Predictor Summary:

cytosol 2
plastid 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, secretory
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55240	Soybean	cytosol	44.92	64.63
CDY58991	Canola	cytosol	31.36	45.12
Os11t0707050-00	Rice	cytosol, nucleus, plastid	22.03	36.11
KRH73060	Soybean	nucleus, plastid	79.66	19.67
KRH15079	Soybean	nucleus, plastid	75.42	18.62
KRH31002	Soybean	nucleus, plastid	68.64	18.28
VIT_06s0004g05180.t01	Wine grape	plastid	72.88	18.22
PGSC0003DMT400091016	Potato	plastid	27.97	17.93
KRG97874	Soybean	plastid	66.95	17.83
KRH65878	Soybean	plastid	71.19	17.72
Solyc09g011080.2.1	Tomato	plastid	63.56	17.08
GSMUA_Achr11P...	Banana	plasma membrane, plastid	61.02	16.44
Bra017055.1-P	Field mustard	plastid	61.02	16.25
TraesCS4A01G177600.1	Wheat	plastid	59.32	16.2
TraesCS4B01G140200.1	Wheat	plastid	59.32	16.2
TraesCS4D01G134900.1	Wheat	plastid	59.32	16.2
Os11t0707000-02	Rice	plastid	59.32	16.17
Bra000144.1-P	Field mustard	plastid	64.41	16.0
GSMUA_Achr2P16450_001	Banana	plastid	63.56	15.79
Bra005019.1-P	Field mustard	plastid	63.56	15.79
Solyc10g086580.1.1	Tomato	plastid	59.32	15.73
Zm00001d048593_P001	Maize	plastid	57.63	15.7
EES10316	Sorghum	plastid	58.47	15.68
AT2G39730.1	Thale cress	plastid	61.86	15.4
TraesCS4D01G135000.9	Wheat	plastid	59.32	15.09
TraesCS4A01G177500.1	Wheat	plastid	58.47	14.87
Zm00001d048592_P001	Maize	plastid	57.63	14.69
TraesCS4B01G140300.1	Wheat	plastid	57.63	14.66
EES10317	Sorghum	plastid	56.78	14.16
HORVU4Hr1G027260.12	Barley	cytosol	55.93	14.16
GSMUA_Achr10P...	Banana	plastid	41.53	12.04
Os11t0707100-00	Rice	golgi, mitochondrion, plastid	19.49	11.5
KRH23699	Soybean	plastid	27.97	7.71

Protein Annotations

Gene3D:1.10.8.1070	EntrezGene:100780891	MapMan:35.1	EMBL:ACUP02000510	EnsemblPlantsGene:GLYMA_01G114100	GO:GO:0003674
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009536
GO:GO:0009570	GO:GO:0009579	GO:GO:0030234	GO:GO:0043085	GO:GO:0046863	UniProt:K7K374
EnsemblPlants:KRH75848	ProteinID:KRH75848	ProteinID:KRH75848.1	PANTHER:PTHR32429	PANTHER:PTHR32429:SF12	UniParc:UPI0002336B6F

Description

hypothetical protein

Coordinates

chr1:-:39440109..39440465

Molecular Weight (calculated)

13572.3 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.352

Length

118 amino acids

Sequence
(BLAST)

001: MSLHYNKTNG MQFMIAYFFG ALKARVYDDE VRKWISVVGV DFIGKKLVNS KEGPPNFDQP KMTLSKLLEY GNMLVQEQEN VERVQLADMY LKEAALGDAN
101: QDSINRGTFY GLFFYPEP

Best Arabidopsis Sequence Match ( AT2G39730.2 )
(BLAST)

001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKTE EKEPSK

Arabidopsis Description

RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.