Factsheet for Os11t0707000-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

extracellular: 25047395
plastid: 27126603

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 27126603 doi

Y Wang, K Ji, S Shen, H Chen

Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China. Electronic address: chenh@ibcas.ac.cn., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G177600.1	Wheat	plastid	86.14	86.34
TraesCS4D01G134900.1	Wheat	plastid	86.14	86.34
TraesCS4B01G140200.1	Wheat	plastid	85.91	86.11
TraesCS4B01G140300.1	Wheat	plastid	88.68	82.76
TraesCS4A01G177500.1	Wheat	plastid	88.22	82.33
TraesCS4D01G135000.9	Wheat	plastid	87.99	82.11
Zm00001d048593_P001	Maize	plastid	81.99	81.99
EES10316	Sorghum	plastid	81.29	80.0
GSMUA_Achr11P...	Banana	plasma membrane, plastid	80.6	79.68
HORVU4Hr1G027260.12	Barley	cytosol	85.22	79.18
GSMUA_Achr10P...	Banana	plastid	74.36	79.12
CDX93240	Canola	plastid	79.21	78.13
VIT_13s0019g02050.t01	Wine grape	plastid	78.06	77.17
Bra017055.1-P	Field mustard	plastid	78.75	76.98
KRG97874	Soybean	plastid	78.52	76.75
KRH31002	Soybean	nucleus, plastid	78.52	76.75
Solyc09g011080.2.1	Tomato	plastid	77.14	76.08
PGSC0003DMT400028767	Potato	plastid	76.44	75.57
PGSC0003DMT400049256	Potato	cytosol, plastid	75.98	75.29
Solyc10g086580.1.1	Tomato	plastid	76.21	74.16
CDX74838	Canola	plastid	79.91	73.93
CDY20474	Canola	plastid	79.68	73.72
GSMUA_Achr2P16450_001	Banana	plastid	80.83	73.68
VIT_06s0004g05180.t01	Wine grape	plastid	79.91	73.31
VIT_08s0007g00840.t01	Wine grape	plastid	79.91	73.0
CDY24950	Canola	plastid	79.91	72.84
CDY07640	Canola	plastid	79.68	72.63
AT2G39730.1	Thale cress	plastid	79.45	72.57
Bra005019.1-P	Field mustard	plastid	79.21	72.21
KRH73060	Soybean	nucleus, plastid	79.68	72.18
KRH15079	Soybean	nucleus, plastid	79.68	72.18
Zm00001d048592_P001	Maize	plastid	76.91	71.92
Bra000144.1-P	Field mustard	plastid	78.52	71.58
KRH65878	Soybean	plastid	78.06	71.31
EES10317	Sorghum	plastid	77.14	70.61
CDY68720	Canola	cytosol	17.55	63.33
CDY21872	Canola	cytosol	17.78	60.16
KRH75848	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	16.17	59.32
KRH55240	Soybean	cytosol	10.39	54.88
Os04t0658300-01	Rice	plastid	42.26	41.5
Os11t0707100-00	Rice	golgi, mitochondrion, plastid	18.71	40.5
Os11t0707050-00	Rice	cytosol, nucleus, plastid	6.24	37.5
PGSC0003DMT400091016	Potato	plastid	13.63	32.07

Protein Annotations

Gene3D:1.10.8.1070	MapMan:1.2.1.3.2	Gene3D:3.40.50.300	ProteinID:AAX95286.1	EMBL:AK064986	InterPro:ATPase_AAA_core
ProteinID:BAT15415.1	ProteinID:BAT15416.1	UniProt:G8CTM8	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0030234	GO:GO:0043085
GO:GO:0046863	EMBL:HQ324826	EMBL:KC140121	EnsemblPlantsGene:Os11g0707000	EnsemblPlants:Os11t0707000-02	InterPro:P-loop_NTPase
PFAM:PF00004	PANTHER:PTHR32429	PANTHER:PTHR32429:SF8	SUPFAM:SSF52540	UniParc:UPI00000A5DC6	:

Description

Rubisco activase, the small isoform of rice Rubisco activase, Rubisco activase small isoform, "ribulose-1, 5-bisphosphate carboxylase/oxygenase activase", Rubisco activase II, Rubisco activase large isoform, Rubisco activase I, Rubisco-A, RuBisCO activase A1Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic. (Os11t0707000-01);Ribulose-bisphosphate carboxylase activase (EC 6.3.4.-) (Fragments). (Os11t0707000-02);Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic. (Os11t0707000-03);Non-protein coding transcript. (Os11t0707000-04)

Coordinates

chr11:-:28932985..28936031

Molecular Weight (calculated)

47933.1 Da

IEP (calculated)

5.921

GRAVY (calculated)

-0.406

Length

433 amino acids

Sequence
(BLAST)

001: MAAAFSSTVG APASTPTNFL GKKLKKQVTS AVNYHGKSSN INRFKVMAKE LDEGKQTDQD RWKGLAYDIS DDQQDITRGK GFVDSLFQAP TGDGTHEAVL
101: SSYEYLSQGL RTYDFDNTMG GFYIAPAFMD KLVVHISKNF MTLPNIKVPL ILGIWGGKGQ GKSFQCELVF AKMGINPIMM SAGELESGNA GEPAKLIRQR
201: YREAADIIKK GKMCCLFIND LDAGAGRMGG TTQYTVNNQM VNATLMNIAD NPTNVQLPGM YNKEDNPRVP IIVTGNDFST LYAPLIRDGR MEKFYWAPTR
301: DDRVGVCKGI FRTDNVPDED IVKIVDSFPG QSIDFFGALR ARVYDDEVRK WVSDTGVENI GKRLVNSREG PPEFEQPKMT IEKLMEYGYM LVKEQENVKR
401: VQLAEQYLSE AALGDANSDA MKTGSFYGSA PSS

Best Arabidopsis Sequence Match ( AT2G39730.3 )
(BLAST)

001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKTE V

Arabidopsis Description

RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.