Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07640 | Canola | plastid | 94.3 | 94.11 |
| CDX93240 | Canola | plastid | 87.13 | 94.08 |
| CDY24950 | Canola | plastid | 93.67 | 93.47 |
| Bra017055.1-P | Field mustard | plastid | 87.13 | 93.23 |
| Bra000144.1-P | Field mustard | plastid | 93.25 | 93.05 |
| CDY20474 | Canola | plastid | 90.93 | 92.09 |
| Bra005019.1-P | Field mustard | plastid | 92.19 | 92.0 |
| CDX74838 | Canola | plastid | 90.08 | 91.24 |
| VIT_08s0007g00840.t01 | Wine grape | plastid | 81.65 | 81.65 |
| VIT_06s0004g05180.t01 | Wine grape | plastid | 81.01 | 81.36 |
| GSMUA_Achr10P... | Banana | plastid | 69.41 | 80.84 |
| VIT_13s0019g02050.t01 | Wine grape | plastid | 74.47 | 80.59 |
| GSMUA_Achr2P16450_001 | Banana | plastid | 79.96 | 79.79 |
| KRH31002 | Soybean | nucleus, plastid | 74.47 | 79.68 |
| KRH73060 | Soybean | nucleus, plastid | 80.17 | 79.5 |
| KRH15079 | Soybean | nucleus, plastid | 80.17 | 79.5 |
| KRG97874 | Soybean | plastid | 74.26 | 79.46 |
| GSMUA_Achr11P... | Banana | plasma membrane, plastid | 73.42 | 79.45 |
| Os11t0707000-02 | Rice | plastid | 72.57 | 79.45 |
| KRH65878 | Soybean | plastid | 78.69 | 78.69 |
| PGSC0003DMT400028767 | Potato | plastid | 72.15 | 78.08 |
| TraesCS4D01G134900.1 | Wheat | plastid | 70.68 | 77.55 |
| TraesCS4A01G177600.1 | Wheat | plastid | 70.68 | 77.55 |
| Zm00001d048592_P001 | Maize | plastid | 75.53 | 77.32 |
| TraesCS4B01G140200.1 | Wheat | plastid | 70.25 | 77.08 |
| TraesCS4D01G135000.9 | Wheat | plastid | 75.32 | 76.94 |
| TraesCS4B01G140300.1 | Wheat | plastid | 75.32 | 76.94 |
| Zm00001d048593_P001 | Maize | plastid | 70.25 | 76.91 |
| TraesCS4A01G177500.1 | Wheat | plastid | 75.11 | 76.72 |
| Solyc09g011080.2.1 | Tomato | plastid | 70.89 | 76.54 |
| PGSC0003DMT400049256 | Potato | cytosol, plastid | 70.25 | 76.2 |
| EES10316 | Sorghum | plastid | 70.25 | 75.68 |
| EES10317 | Sorghum | plastid | 74.68 | 74.84 |
| Solyc10g086580.1.1 | Tomato | plastid | 70.25 | 74.83 |
| Os11t0707050-00 | Rice | cytosol, nucleus, plastid | 10.76 | 70.83 |
| HORVU4Hr1G027260.12 | Barley | cytosol | 69.41 | 70.6 |
| KRH75848 | Soybean | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 15.4 | 61.86 |
| KRH55240 | Soybean | cytosol | 9.49 | 54.88 |
| AT1G73110.1 | Thale cress | plastid | 37.55 | 41.2 |
| Os11t0707100-00 | Rice | golgi, mitochondrion, plastid | 16.24 | 38.5 |
| PGSC0003DMT400091016 | Potato | plastid | 11.81 | 30.43 |
Protein Annotations
| Gene3D:1.10.8.1070 | MapMan:1.2.1.3.2 | Gene3D:3.40.50.300 | PDB:4W5W | EntrezGene:818558 | ProteinID:AAA20202.1 |
| ProteinID:AAA20203.1 | ProteinID:AAB87122.1 | ProteinID:AEC09714.1 | ProteinID:AEC09715.1 | EMBL:AF325049 | ArrayExpress:AT2G39730 |
| EnsemblPlantsGene:AT2G39730 | RefSeq:AT2G39730 | TAIR:AT2G39730 | RefSeq:AT2G39730-TAIR-G | EnsemblPlants:AT2G39730.1 | TAIR:AT2G39730.1 |
| InterPro:ATPase_AAA_core | EMBL:AY052290 | EMBL:AY052703 | EMBL:AY056108 | EMBL:AY088487 | Unigene:At.47493 |
| EMBL:BT000613 | EMBL:BT000710 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009409 | GO:GO:0009416 |
| GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009753 | GO:GO:0009941 | GO:GO:0010150 |
| GO:GO:0010287 | GO:GO:0010319 | GO:GO:0016020 | GO:GO:0030234 | GO:GO:0030312 | GO:GO:0042742 |
| GO:GO:0043085 | GO:GO:0043531 | GO:GO:0046863 | GO:GO:0048046 | GO:GO:0050790 | RefSeq:NP_565913.1 |
| RefSeq:NP_850320.1 | InterPro:P-loop_NTPase | UniProt:P10896 | PFAM:PF00004 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR32429 | PANTHER:PTHR32429:SF8 | Symbol:RCA |
| SUPFAM:SSF52540 | UniParc:UPI0000000A84 | EMBL:X14212 | SEG:seg | : | : |
Description
RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
Coordinates
chr2:-:16570746..16573692
Molecular Weight (calculated)
51984.2 Da
IEP (calculated)
5.929
GRAVY (calculated)
-0.308
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKGA QQVNLPVPEG CTDPVAENFD PTARSDDGTC VYNF
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKGA QQVNLPVPEG CTDPVAENFD PTARSDDGTC VYNF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.