Factsheet for GSMUA_Achr10P00480_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane, plastid	92.87	86.3
GSMUA_Achr2P16450_001	Banana	plastid	91.15	78.11
VIT_13s0019g02050.t01	Wine grape	plastid	84.03	78.08
KRG97874	Soybean	plastid	82.06	75.39
PGSC0003DMT400028767	Potato	plastid	80.84	75.11
Os11t0707000-02	Rice	plastid	79.12	74.36
KRH31002	Soybean	nucleus, plastid	80.59	74.04
CDX93240	Canola	plastid	79.85	74.03
TraesCS4A01G177600.1	Wheat	plastid	78.38	73.84
TraesCS4B01G140200.1	Wheat	plastid	78.38	73.84
TraesCS4D01G134900.1	Wheat	plastid	78.38	73.84
VIT_08s0007g00840.t01	Wine grape	plastid	85.5	73.42
Bra017055.1-P	Field mustard	plastid	79.85	73.36
Solyc09g011080.2.1	Tomato	plastid	78.62	72.89
Zm00001d048593_P001	Maize	plastid	77.15	72.52
PGSC0003DMT400049256	Potato	cytosol, plastid	77.4	72.08
VIT_06s0004g05180.t01	Wine grape	plastid	83.54	72.03
KRH65878	Soybean	plastid	83.29	71.52
EES10316	Sorghum	plastid	76.66	70.91
KRH15079	Soybean	nucleus, plastid	82.8	70.5
KRH73060	Soybean	nucleus, plastid	82.8	70.5
Solyc10g086580.1.1	Tomato	plastid	76.66	70.11
CDY07640	Canola	plastid	81.57	69.89
CDY24950	Canola	plastid	81.57	69.89
AT2G39730.1	Thale cress	plastid	80.84	69.41
Bra005019.1-P	Field mustard	plastid	80.59	69.05
CDY20474	Canola	plastid	79.36	69.02
Bra000144.1-P	Field mustard	plastid	80.34	68.84
CDX74838	Canola	plastid	78.87	68.59
TraesCS4B01G140300.1	Wheat	plastid	75.43	66.16
TraesCS4A01G177500.1	Wheat	plastid	75.43	66.16
TraesCS4D01G135000.9	Wheat	plastid	75.18	65.95
HORVU4Hr1G027260.12	Barley	cytosol	75.18	65.67
Zm00001d048592_P001	Maize	plastid	74.69	65.66
EES10317	Sorghum	plastid	75.68	65.12
CDY68720	Canola	cytosol	12.78	43.33
KRH75848	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	12.04	41.53
CDY21872	Canola	cytosol	12.78	40.62
GSMUA_Achr10P...	Banana	plastid	41.28	40.0
Os11t0707100-00	Rice	golgi, mitochondrion, plastid	18.92	38.5
KRH55240	Soybean	cytosol	7.37	36.59
Os11t0707050-00	Rice	cytosol, nucleus, plastid	6.14	34.72
PGSC0003DMT400091016	Potato	plastid	11.79	26.09

Protein Annotations

EnsemblPlants:GSMUA_Achr10P00480_001	EnsemblPlants:GSMUA_Achr10T00480_001	EnsemblPlantsGene:GSMUA_Achr10G00480_001	Gene3D:1.10.8.1070	Gene3D:3.40.50.300	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase	PANTHER:PTHR32429
PANTHER:PTHR32429:SF8	PFAM:PF00004	SEG:seg	SUPFAM:SSF52540	UniParc:UPI00029526E5	UniProt:M0RE75
MapMan:1.2.1.3.2	:	:	:	:	:

Description

Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G00480_001]

Coordinates

chr10:-:1040580..1042302

Molecular Weight (calculated)

44154.9 Da

IEP (calculated)

7.442

GRAVY (calculated)

-0.155

Length

407 amino acids

Sequence
(BLAST)

001: MAAAVSTVGA VNRVPLSLHG SSSGASVPSS AFFGSALKKA NSGLSHGRVS TASFKVLAAD LDESKQTSSD RWAGLASDVS DDQQDITRGK GLVDTLFQAP
101: MGDGTHIPVM SSYEYISQGL RQYNFDNTMD GYYIAPAFMD KLVVHIAKNF MNLPNIKVPL ILGIWGGKGQ GKSFQCELVF AKMGINPIVM SAGELESGNA
201: GEPAKLIRQR YREAADIIKK GKMCCLFIND LDAGAGRLGG TTQYTVNNQM VNATLMNIAD NPTNVQLPGM YNKQENARVP IIVTGNDFST LYAPLIRDGR
301: MEKFYWAPTR EDRIGVCLGI FRTDNVPMED IVKLVDAFPG QSIDFFGALR ARVYDDEVRK WVAEIGVEKV GKKLENVKRV QLADKYLSEA ALGDANADAI
401: KTGSFYG

Best Arabidopsis Sequence Match ( AT2G39730.2 )
(BLAST)

001: MAAAVSTVGA INRAPLSLNG SGSGAVSAPA STFLGKKVVT VSRFAQSNKK SNGSFKVLAV KEDKQTDGDR WRGLAYDTSD DQQDITRGKG MVDSVFQAPM
101: GTGTHHAVLS SYEYVSQGLR QYNLDNMMDG FYIAPAFMDK LVVHITKNFL TLPNIKVPLI LGIWGGKGQG KSFQCELVMA KMGINPIMMS AGELESGNAG
201: EPAKLIRQRY REAADLIKKG KMCCLFINDL DAGAGRMGGT TQYTVNNQMV NATLMNIADN PTNVQLPGMY NKEENARVPI ICTGNDFSTL YAPLIRDGRM
301: EKFYWAPTRE DRIGVCKGIF RTDKIKDEDI VTLVDQFPGQ SIDFFGALRA RVYDDEVRKF VESLGVEKIG KRLVNSREGP PVFEQPEMTY EKLMEYGNML
401: VMEQENVKRV QLAETYLSQA ALGDANADAI GRGTFYGKTE EKEPSK

Arabidopsis Description

RCARibulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P10896]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.