Factsheet for AT2G19430.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66907	Canola	cytosol	86.1	88.27
Bra039002.1-P	Field mustard	cytosol	86.1	88.27
CDY60743	Canola	cytosol	68.66	82.89
KRH19216	Soybean	nucleus	64.31	63.1
KRH02681	Soybean	nucleus	63.76	62.57
VIT_11s0016g01910.t01	Wine grape	cytosol	62.67	61.83
Solyc07g040780.2.1	Tomato	cytosol, extracellular, nucleus	13.08	59.26
KRH72217	Soybean	cytosol	17.98	56.41
EER98796	Sorghum	cytosol	50.95	49.08
Os09t0363600-01	Rice	nucleus	37.06	48.75
GSMUA_Achr8P24950_001	Banana	nucleus	54.5	48.43
Zm00001d020234_P001	Maize	cytosol	49.59	47.77
TraesCS5A01G195000.2	Wheat	cytosol	49.59	47.64
TraesCS5D01G198200.1	Wheat	cytosol	49.32	47.14
TraesCS5B01G190400.1	Wheat	cytosol	49.32	46.89
HORVU5Hr1G057500.2	Barley	plastid	46.59	43.73
Solyc07g040790.2.1	Tomato	nucleus	48.77	41.15

Protein Annotations

MapMan:16.11.1.1.5	Gene3D:2.130.10.10	EntrezGene:816462	UniProt:A0A178W1M2	ProteinID:AAD10142.1	ProteinID:AAM14874.1
ProteinID:AEC06880.1	ArrayExpress:AT2G19430	EnsemblPlantsGene:AT2G19430	RefSeq:AT2G19430	TAIR:AT2G19430	RefSeq:AT2G19430-TAIR-G
EnsemblPlants:AT2G19430.1	TAIR:AT2G19430.1	EMBL:AY099718	EMBL:AY128879	Symbol:DWA1	GO:GO:0000347
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006397	GO:GO:0006464
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380
GO:GO:0009719	GO:GO:0009738	GO:GO:0009788	GO:GO:0009987	GO:GO:0010267	GO:GO:0016567
GO:GO:0019538	GO:GO:0031047	GO:GO:0040029	GO:GO:0051028	GO:GO:0080008	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	RefSeq:NP_849989.1	ProteinID:OAP11012.1	PFAM:PF00400	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR42968	PANTHER:PTHR42968:SF3	UniProt:Q8L4M1	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000009EB9A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

THO6THO complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4M1]

Coordinates

chr2:+:8415046..8417994

Molecular Weight (calculated)

40075.3 Da

IEP (calculated)

5.579

GRAVY (calculated)

-0.191

Length

367 amino acids

Sequence
(BLAST)

001: MYGDATNWNE DEYRESILKE REIETRTVFR TAWAPPARIS NPDAFVVASS DGTLAFHSLN SLVSQSASFG YSKGQDVMVA EPERVVRAHE GPAYDVKFYG
101: EDEDALLLSC GDDGRVRGWK WREFAESDVS LHLKENHLKP LLELINPQHK GPWGALSPMP EINAMSVDPQ SGSVFTAAGD SCAYCWDVES GKIKMTFKGH
201: SDYLHTVVSR SSASQILTGS EDGTARIWDC KTGKCVKVIG SQDKKSRLRV SSMALDGSES WLVCGQGKNL ALWNLPASEC VQTIPIPAHV QDVMFDEKQI
301: LTVGAEPLLR RFDLNGALLS QIHCAPCSVF SISLHPAGVV AVGGYGGIVD VISQFGSHLC TFRSSSL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.