Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004998.1-P | Field mustard | cytosol | 94.79 | 91.92 |
| CDX74817 | Canola | cytosol | 93.75 | 86.12 |
| AT4G04200.1 | Thale cress | cytosol, golgi, plasma membrane | 81.25 | 82.11 |
| KRH14989 | Soybean | endoplasmic reticulum, mitochondrion | 75.52 | 78.8 |
| KRH73149 | Soybean | endoplasmic reticulum | 75.52 | 78.8 |
| GSMUA_Achr7P18540_001 | Banana | golgi, peroxisome, plasma membrane | 68.23 | 70.81 |
| GSMUA_Achr5P23170_001 | Banana | golgi, peroxisome, plastid | 66.67 | 70.72 |
| PGSC0003DMT400064539 | Potato | golgi | 70.31 | 70.68 |
| Solyc04g072110.2.1 | Tomato | cytosol | 21.88 | 70.0 |
| VIT_13s0019g03400.t01 | Wine grape | plasma membrane | 70.83 | 69.74 |
| Os04t0446300-01 | Rice | plasma membrane, plastid | 63.54 | 63.54 |
| OQU81657 | Sorghum | plasma membrane | 63.02 | 63.02 |
| Os02t0565200-01 | Rice | golgi, plasma membrane, plastid | 60.94 | 61.26 |
| TraesCS2A01G314500.1 | Wheat | golgi | 60.94 | 60.94 |
| TraesCS2B01G332900.1 | Wheat | golgi | 60.94 | 60.94 |
| TraesCS2D01G312700.1 | Wheat | plasma membrane | 60.42 | 60.42 |
| HORVU2Hr1G078290.3 | Barley | golgi, mitochondrion, plastid | 61.46 | 54.63 |
| Zm00001d020624_P002 | Maize | plastid | 19.79 | 53.52 |
| Zm00001d013600_P001 | Maize | cytosol | 19.27 | 49.33 |
| HORVU4Hr1G058460.1 | Barley | golgi | 19.27 | 36.27 |
Protein Annotations
| MapMan:18.10.1.1.3 | EntrezGene:818583 | UniProt:A0A178VMY0 | ProteinID:AEC09756.1 | EMBL:AF002109 | ArrayExpress:AT2G39960 |
| EnsemblPlantsGene:AT2G39960 | RefSeq:AT2G39960 | TAIR:AT2G39960 | RefSeq:AT2G39960-TAIR-G | EnsemblPlants:AT2G39960.1 | TAIR:AT2G39960.1 |
| EMBL:AY065212 | EMBL:AY096518 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005787 | GO:GO:0005789 | GO:GO:0006465 |
| GO:GO:0006508 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0031090 | GO:GO:0043231 |
| GO:GO:0045047 | RefSeq:NP_181525.2 | ProteinID:OAP07164.1 | UniProt:P58684 | PFAM:PF06703 | PO:PO:0000293 |
| PO:PO:0005052 | PO:PO:0025281 | PANTHER:PTHR13085 | InterPro:SigPept_cplx_su2 | TMHMM:TMhelix | UniParc:UPI00000017BB |
Description
Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P58684]
Coordinates
chr2:-:16681296..16683718
Molecular Weight (calculated)
21643.2 Da
IEP (calculated)
9.442
GRAVY (calculated)
-0.154
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKKTESTN KNVKKANLLD HHSIKHILDE SVSDIVTSRG YKEDVRLSNL KLILGTIIIV VALVAQFYNK KFPENRDFLI GCIALYVVLN AVLQLILYTK
101: EKNAILFTYP PEGSFTSTGL VVSSKLPRFS DQYTLTIDSA DPKSISAGKS VQLTKSVTQW FTKDGVLVEG LFWKDVEALI KNYAEEEPKK KK
101: EKNAILFTYP PEGSFTSTGL VVSSKLPRFS DQYTLTIDSA DPKSISAGKS VQLTKSVTQW FTKDGVLVEG LFWKDVEALI KNYAEEEPKK KK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.