Factsheet for Os02t0565200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
golgi 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0509600-01
Os05t0297900-01
Os06t0273800-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39960.1	Os02t0509600-01	AT1G27300.1	21798944
AT2G39960.1	Os05t0297900-01	AT3G15710.1	21798944
AT2G39960.1	Os06t0273800-02	AT3G15710.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0446300-01	Rice	plasma membrane, plastid	73.3	72.92
GSMUA_Achr7P18540_001	Banana	golgi, peroxisome, plasma membrane	69.63	71.89
GSMUA_Achr5P23170_001	Banana	golgi, peroxisome, plastid	66.49	70.17
KRH14989	Soybean	endoplasmic reticulum, mitochondrion	67.54	70.11
KRH73149	Soybean	endoplasmic reticulum	67.02	69.57
CDY07042	Canola	cytosol	36.13	69.0
CDX93221	Canola	cytosol	35.6	68.0
Solyc04g072110.2.1	Tomato	cytosol	20.94	66.67
PGSC0003DMT400064539	Potato	golgi	63.87	63.87
CDY20503	Canola	endoplasmic reticulum	38.74	63.25
VIT_13s0019g03400.t01	Wine grape	plasma membrane	62.83	61.54
AT2G39960.1	Thale cress	cytosol, golgi, plasma membrane	61.26	60.94
CDY60993	Canola	cytosol, endoplasmic reticulum, plasma membrane	60.73	60.1
Bra004998.1-P	Field mustard	cytosol	61.78	59.6
CDY24935	Canola	cytosol	57.59	57.29
CDY24940	Canola	cytosol	57.59	57.29
CDX74817	Canola	cytosol	62.3	56.94
CDX93220	Canola	cytosol	25.13	55.17
AT4G04200.1	Thale cress	cytosol, golgi, plasma membrane	52.88	53.16
CDY07043	Canola	cytosol	27.75	51.46
CDY20504	Canola	cytosol	25.13	48.98
Bra017043.1-P	Field mustard	cytosol	48.17	42.4

Protein Annotations

MapMan:18.10.1.1.3	EntrezGene:4329702	EMBL:AK061593	EMBL:AK102047	ProteinID:BAD15825.1	ProteinID:BAF09079.1
ProteinID:BAS79296.1	ProteinID:EAZ23482.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005787	GO:GO:0006465	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	GO:GO:0045047	EnsemblPlantsGene:Os02g0565200	EnsemblPlants:Os02t0565200-01	PFAM:PF06703
PANTHER:PTHR13085	UniProt:Q6Z7E3	InterPro:SigPept_cplx_su2	TMHMM:TMhelix	UniParc:UPI0000358B9A	RefSeq:XP_015623270.1
SEG:seg	:	:	:	:	:

Description

Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-01);Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-02)

Coordinates

chr2:-:21462278..21464508

Molecular Weight (calculated)

20919.1 Da

IEP (calculated)

9.466

GRAVY (calculated)

-0.147

Length

191 amino acids

Sequence
(BLAST)

001: MATDGGGATP SPAAKKANLL DPYSIKHLLD ETVSEVAKSK GYPEDARLSN RRLAVGAAVI AVALLAQFYP RKFPENRDVL LACIALYAAL NVALQIVTYT
101: KEKNAILFTY PPAGSFNRTG LVISSKLPRL SDMYTLTIAS ADPHSKSSSE PVHFTKSVTK WFTKDGVLVE GLFWKDVEKL IDDYNSDHRS K

Best Arabidopsis Sequence Match ( AT2G39960.1 )
(BLAST)

001: MEEKKTESTN KNVKKANLLD HHSIKHILDE SVSDIVTSRG YKEDVRLSNL KLILGTIIIV VALVAQFYNK KFPENRDFLI GCIALYVVLN AVLQLILYTK
101: EKNAILFTYP PEGSFTSTGL VVSSKLPRFS DQYTLTIDSA DPKSISAGKS VQLTKSVTQW FTKDGVLVEG LFWKDVEALI KNYAEEEPKK KK

Arabidopsis Description

Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P58684]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.