CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, nucleus
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93220	Canola	cytosol	79.61	94.25
CDY20504	Canola	cytosol	80.58	84.69
CDY60993	Canola	cytosol, endoplasmic reticulum, plasma membrane	77.67	41.45
CDX74817	Canola	cytosol	82.52	40.67
CDY24935	Canola	cytosol	66.02	35.42
CDY24940	Canola	cytosol	66.02	35.42
AT4G04200.1	Thale cress	cytosol, golgi, plasma membrane	64.08	34.74
KRH14989	Soybean	endoplasmic reticulum, mitochondrion	58.25	32.61
KRH73149	Soybean	endoplasmic reticulum	57.28	32.07
GSMUA_Achr7P18540_001	Banana	golgi, peroxisome, plasma membrane	56.31	31.35
GSMUA_Achr5P23170_001	Banana	golgi, peroxisome, plastid	54.37	30.94
PGSC0003DMT400064539	Potato	golgi	57.28	30.89
VIT_13s0019g03400.t01	Wine grape	plasma membrane	58.25	30.77
Os02t0565200-01	Rice	golgi, plasma membrane, plastid	51.46	27.75
Os04t0446300-01	Rice	plasma membrane, plastid	51.46	27.6
OQU81657	Sorghum	plasma membrane	50.49	27.08
TraesCS2A01G314500.1	Wheat	golgi	50.49	27.08
TraesCS2B01G332900.1	Wheat	golgi	49.51	26.56
TraesCS2D01G312700.1	Wheat	plasma membrane	49.51	26.56
HORVU2Hr1G078290.3	Barley	golgi, mitochondrion, plastid	52.43	25.0
HORVU4Hr1G058460.1	Barley	golgi	23.3	23.53
Zm00001d013600_P001	Maize	cytosol	5.83	8.0
Zm00001d020624_P002	Maize	plastid	4.85	7.04
CDY07042	Canola	cytosol	6.8	7.0
CDX93221	Canola	cytosol	6.8	7.0
CDY20503	Canola	endoplasmic reticulum	7.77	6.84
Solyc04g072110.2.1	Tomato	cytosol	3.88	6.67

Protein Annotations

KEGG:00261+3.4.-.-	KEGG:00310+3.4.-.-	KEGG:00550+3.4.-.-	KEGG:00780+3.4.-.-	MapMan:18.10.1.1.3	GO:A0A078F5Y2
EnsemblPlants:CDY07043	ProteinID:CDY07043	ProteinID:CDY07043.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005787	GO:GO:0006465
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00123360001	PFAM:PF06703	PANTHER:PTHR13085	InterPro:SigPept_cplx_su2
TMHMM:TMhelix	UniParc:UPI0004EDB61A	:	:	:	:

Description

BnaA04g22720D

Coordinates

chrLK031974:-:816747..817208

Molecular Weight (calculated)

11740.5 Da

IEP (calculated)

9.825

GRAVY (calculated)

-0.036

Length

103 amino acids

Sequence
(BLAST)

001: MEEKKAESTN KNAKKVNLLD HNSIKHMLDE SVSDIVTSRG YKEDVRLSNM KLILGTVIIA VALVAQFYNK KFPENRDFLI GCIALYPFLN VKSLLWIRLM
101: PSA

Best Arabidopsis Sequence Match ( AT2G39960.1 )
(BLAST)

001: MEEKKTESTN KNVKKANLLD HHSIKHILDE SVSDIVTSRG YKEDVRLSNL KLILGTIIIV VALVAQFYNK KFPENRDFLI GCIALYVVLN AVLQLILYTK
101: EKNAILFTYP PEGSFTSTGL VVSSKLPRFS DQYTLTIDSA DPKSISAGKS VQLTKSVTQW FTKDGVLVEG LFWKDVEALI KNYAEEEPKK KK

Arabidopsis Description

Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P58684]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.