CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93221	Canola	cytosol	95.0	95.0
CDY20503	Canola	endoplasmic reticulum	89.0	76.07
Solyc04g072110.2.1	Tomato	cytosol	43.0	71.67
CDY24935	Canola	cytosol	95.0	49.48
CDY24940	Canola	cytosol	95.0	49.48
Zm00001d020624_P002	Maize	plastid	34.0	47.89
CDY60993	Canola	cytosol, endoplasmic reticulum, plasma membrane	91.0	47.15
Bra017043.1-P	Field mustard	cytosol	98.0	45.16
KRH73149	Soybean	endoplasmic reticulum	82.0	44.57
KRH14989	Soybean	endoplasmic reticulum, mitochondrion	81.0	44.02
Zm00001d013600_P001	Maize	cytosol	33.0	44.0
CDX74817	Canola	cytosol	91.0	43.54
PGSC0003DMT400064539	Potato	golgi	78.0	40.84
GSMUA_Achr7P18540_001	Banana	golgi, peroxisome, plasma membrane	75.0	40.54
GSMUA_Achr5P23170_001	Banana	golgi, peroxisome, plastid	72.0	39.78
VIT_13s0019g03400.t01	Wine grape	plasma membrane	74.0	37.95
OQU81657	Sorghum	plasma membrane	72.0	37.5
Os04t0446300-01	Rice	plasma membrane, plastid	71.0	36.98
Os02t0565200-01	Rice	golgi, plasma membrane, plastid	69.0	36.13
TraesCS2A01G314500.1	Wheat	golgi	69.0	35.94
TraesCS2B01G332900.1	Wheat	golgi	68.0	35.42
TraesCS2D01G312700.1	Wheat	plasma membrane	68.0	35.42
HORVU2Hr1G078290.3	Barley	golgi, mitochondrion, plastid	69.0	31.94
HORVU4Hr1G058460.1	Barley	golgi	9.0	8.82
CDY07043	Canola	cytosol	7.0	6.8
CDY20504	Canola	cytosol	4.0	4.08
CDX93220	Canola	cytosol	2.0	2.3

Protein Annotations

KEGG:00261+3.4.-.-	KEGG:00310+3.4.-.-	KEGG:00550+3.4.-.-	KEGG:00780+3.4.-.-	MapMan:18.10.1.1.3	GO:A0A078F1T6
EnsemblPlants:CDY07042	ProteinID:CDY07042	ProteinID:CDY07042.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005787	GO:GO:0006465
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00123359001	PFAM:PF06703	PANTHER:PTHR13085	InterPro:SigPept_cplx_su2
UniParc:UPI0004EE3E98	:	:	:	:	:

Description

BnaA04g22730D

Coordinates

chrLK031974:-:815378..816651

Molecular Weight (calculated)

11272.5 Da

IEP (calculated)

8.895

GRAVY (calculated)

-0.262

Length

100 amino acids

Sequence
(BLAST)

1: MQLILFTKEK NAILFTYPLE GSFTSTGLVV SSKLPRFSDD YTLTIDSADP KSISAGKSVQ FTKSVTQWFT KEGVLVEGLF WKDVEALIKD YANEEPKKKK

Best Arabidopsis Sequence Match ( AT2G39960.1 )
(BLAST)

001: MEEKKTESTN KNVKKANLLD HHSIKHILDE SVSDIVTSRG YKEDVRLSNL KLILGTIIIV VALVAQFYNK KFPENRDFLI GCIALYVVLN AVLQLILYTK
101: EKNAILFTYP PEGSFTSTGL VVSSKLPRFS DQYTLTIDSA DPKSISAGKS VQLTKSVTQW FTKDGVLVEG LFWKDVEALI KNYAEEEPKK KK

Arabidopsis Description

Probable signal peptidase complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P58684]
SUBAcon: [cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.