Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18913 | Canola | mitochondrion | 88.16 | 88.16 |
| Bra004926.1-P | Field mustard | mitochondrion | 88.16 | 88.16 |
| CDX74753 | Canola | mitochondrion | 86.18 | 85.62 |
| CDY60684 | Canola | mitochondrion | 38.16 | 72.5 |
| KRH65197 | Soybean | nucleus | 71.05 | 71.52 |
| VIT_15s0048g01290.t01 | Wine grape | nucleus | 70.39 | 70.39 |
| PGSC0003DMT400035608 | Potato | cytosol | 70.39 | 68.59 |
| Solyc05g047690.2.1 | Tomato | nucleus | 70.39 | 68.59 |
| CDY53883 | Canola | cytosol | 26.97 | 67.21 |
| KRH48306 | Soybean | cytosol | 31.58 | 66.67 |
| Os02t0122000-01 | Rice | nucleus, plastid | 66.45 | 66.45 |
| GSMUA_Achr3P12560_001 | Banana | cytosol | 64.47 | 64.47 |
| EES06194 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 63.16 | 63.16 |
| Zm00001d015058_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 63.16 | 63.16 |
| TraesCS6A01G067100.1 | Wheat | nucleus | 61.18 | 62.0 |
| TraesCSU01G117100.1 | Wheat | cytosol | 61.18 | 62.0 |
| TraesCS6B01G090300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 61.18 | 61.18 |
| HORVU6Hr1G012050.4 | Barley | plastid | 61.18 | 46.5 |
| Zm00001d053919_P001 | Maize | plastid | 58.55 | 42.18 |
Protein Annotations
| MapMan:12.3.2.4.3 | Gene3D:3.10.20.550 | EntrezGene:819172 | UniProt:A0A178VW39 | ProteinID:AAC06174.1 | ProteinID:AEC10580.1 |
| EMBL:AF378876 | EMBL:AK227453 | ArrayExpress:AT2G45640 | EnsemblPlantsGene:AT2G45640 | RefSeq:AT2G45640 | TAIR:AT2G45640 |
| RefSeq:AT2G45640-TAIR-G | EnsemblPlants:AT2G45640.1 | TAIR:AT2G45640.1 | EMBL:AY050474 | EMBL:AY088934 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009737 |
| GO:GO:0009987 | InterPro:Hist_deAcase_cplx_SAP18 | RefSeq:NP_566050.1 | UniProt:O64644 | ProteinID:OAP10590.1 | PFAM:PF06487 |
| PIRSF:PIRSF037637 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR13082 | InterPro:SAP18 | Symbol:SAP18 | UniParc:UPI0000000AC7 | SEG:seg |
Description
SAP18SAP18 [Source:UniProtKB/TrEMBL;Acc:A0A178VW39]
Coordinates
chr2:-:18799528..18801383
Molecular Weight (calculated)
17165.3 Da
IEP (calculated)
9.572
GRAVY (calculated)
-0.871
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAARRQGG GRPLPPPPRG VNQQPPRPKP EPVDREKTCP LLLRVFTKSG GHHTSEDYAV RGKEPKDEVQ IYTWKDASLR ELTDLVKEVS VAARRRNARL
101: SFAFVYPNNK GGYNVREVGE TMAYPNRKQP DDSKTLSELP FEIGDYLDVA IY
101: SFAFVYPNNK GGYNVREVGE TMAYPNRKQP DDSKTLSELP FEIGDYLDVA IY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.