Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G117100.1 | Wheat | cytosol | 74.0 | 98.67 |
| TraesCS6A01G067100.1 | Wheat | nucleus | 74.0 | 98.67 |
| TraesCS6B01G090300.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 73.0 | 96.05 |
| Zm00001d015058_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 65.5 | 86.18 |
| EES06194 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 65.5 | 86.18 |
| Os02t0122000-01 | Rice | nucleus, plastid | 63.0 | 82.89 |
| GSMUA_Achr3P12560_001 | Banana | cytosol | 55.0 | 72.37 |
| KRH48306 | Soybean | cytosol | 25.5 | 70.83 |
| VIT_15s0048g01290.t01 | Wine grape | nucleus | 53.0 | 69.74 |
| KRH65197 | Soybean | nucleus | 51.0 | 67.55 |
| Solyc05g047690.2.1 | Tomato | nucleus | 51.5 | 66.03 |
| PGSC0003DMT400035608 | Potato | cytosol | 51.0 | 65.38 |
| Bra004926.1-P | Field mustard | mitochondrion | 49.5 | 65.13 |
| CDY18913 | Canola | mitochondrion | 49.5 | 65.13 |
| CDX74753 | Canola | mitochondrion | 49.5 | 64.71 |
| AT2G45640.1 | Thale cress | cytosol | 46.5 | 61.18 |
| Zm00001d053919_P001 | Maize | plastid | 62.0 | 58.77 |
| CDY60684 | Canola | mitochondrion | 23.5 | 58.75 |
| CDY53883 | Canola | cytosol | 16.0 | 52.46 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G012050.4 | EnsemblPlantsGene:HORVU6Hr1G012050 | Gene3D:3.10.20.550 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009737 | InterPro:SAP18 | PANTHER:PTHR13082 | PFAM:PF06487 | SEG:seg |
| UniParc:UPI000B4750C3 | UniProt:A0A287TBW4 | MapMan:12.3.2.4.3 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:22810472..22813846
Molecular Weight (calculated)
22238.7 Da
IEP (calculated)
10.307
GRAVY (calculated)
-0.639
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: GFLPETSTRF GLPPFIRTPP PPPREESGGG RRTASDSGSG FGILAFSRRE MAGMGEMPMR PRPGPPMHRG PPPMARPRPE PIDREKTCPL LLRVFTKVGG
101: HHLNEEFSER GKEPKDEVQI YTWKDATLRE LTDLVKEVAL PARKRNARLS FAFVYPDKNG RFVVKQVGST FSYSHGRGDD AKSLGDLGFQ IGDYLSVSIM
101: HHLNEEFSER GKEPKDEVQI YTWKDATLRE LTDLVKEVAL PARKRNARLS FAFVYPDKNG RFVVKQVGST FSYSHGRGDD AKSLGDLGFQ IGDYLSVSIM
001: MAEAARRQGG GRPLPPPPRG VNQQPPRPKP EPVDREKTCP LLLRVFTKSG GHHTSEDYAV RGKEPKDEVQ IYTWKDASLR ELTDLVKEVS VAARRRNARL
101: SFAFVYPNNK GGYNVREVGE TMAYPNRKQP DDSKTLSELP FEIGDYLDVA IY
101: SFAFVYPNNK GGYNVREVGE TMAYPNRKQP DDSKTLSELP FEIGDYLDVA IY
Arabidopsis Description
SAP18SAP18 [Source:UniProtKB/TrEMBL;Acc:A0A178VW39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.