Factsheet for AT3G46780.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033802.1-P	Field mustard	plastid	86.47	86.3
CDX83004	Canola	plastid	86.08	85.91
CDX68407	Canola	plastid	82.55	84.2
KRH29743	Soybean	plastid	63.92	63.18
KRH24736	Soybean	nucleus, plastid	62.55	62.18
VIT_06s0004g05230.t01	Wine grape	plastid	62.35	61.63
PGSC0003DMT400005492	Potato	plastid	58.63	60.4
Solyc06g005710.2.1	Tomato	plastid	58.04	59.68
GSMUA_Achr10P...	Banana	mitochondrion	58.43	56.87
Os05t0291700-02	Rice	plastid	49.22	50.71
TraesCS3D01G256700.2	Wheat	plastid	47.25	48.39
TraesCS3A01G256400.2	Wheat	plastid	47.25	48.39
TraesCS3B01G289600.2	Wheat	plastid	47.06	48.19
Zm00001d009877_P001	Maize	plastid	46.27	47.58
OQU77706	Sorghum	plastid	34.12	46.77
OQU77707	Sorghum	cytosol, mitochondrion, nucleus	12.75	39.16
HORVU3Hr1G065580.2	Barley	mitochondrion	17.06	37.66

Protein Annotations

MapMan:15.6.1.2.3.6	Gene3D:3.40.50.720	EntrezGene:823831	ProteinID:AEE78204.1	EMBL:AF367356	ArrayExpress:AT3G46780
EnsemblPlantsGene:AT3G46780	RefSeq:AT3G46780	TAIR:AT3G46780	RefSeq:AT3G46780-TAIR-G	EnsemblPlants:AT3G46780.1	TAIR:AT3G46780.1
EMBL:AY143885	Unigene:At.21714	ProteinID:CAB51187.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007623
GO:GO:0008150	GO:GO:0009295	GO:GO:0009507	GO:GO:0009508	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009941	GO:GO:0016020	GO:GO:0042644	GO:GO:0098572
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_566886.2	PFAM:PF13460	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	Symbol:PTAC16	PANTHER:PTHR14194	PANTHER:PTHR14194:SF95
UniProt:Q9STF2	SUPFAM:SSF51735	UniParc:UPI00000A073C	SEG:seg	:	:

Description

PTAC16Protein plastid transcriptionally active 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STF2]

Coordinates

chr3:+:17228642..17231229

Molecular Weight (calculated)

54361.1 Da

IEP (calculated)

9.535

GRAVY (calculated)

-0.349

Length

510 amino acids

Sequence
(BLAST)

001: MASSSTSFPL TTAPPQGVRF NRRKPRLTVW AKQTAFQLGK TKGDDDSEGK QKGKNPFQFD FGKLPDMKSL IPVVTNPSTG LVFGNNRKKD PGTIFVAGAT
101: GQAGIRIAQT LLQRGFSVRA GVPDLGAAQD LARVAATYKI LSNDEVKRLN AVQSPFQDAE SIAKAIGNAT KVVVTVGATE NGPDAQVSTS DALLVVQAAE
201: LAGVSHVAIV YDGTISGSTY NVLDGITSFF GNLFAKSQPL TISDLIEKVA QTDVAYTLIK TSLTEDFSPE KAYNVVVSAE GSNSGSGSSS SEAYKVPKLK
301: IASLVADIFA NTAVAENKVV EVSTDPSAPS RPVDELFSVI PEDGRRKVYA DAIARERAEE EAKVAADKAR EAAEAAKEFE KQMQKLSEKE AEAASLAEDA
401: QQKADAVGVT VDGLFNKAKD ISSGLSWNKL GSQFATAIQN ASETPKVQVA TVRGQAKARN LPPKKAVVKQ RPSSPFASKP KEERPKKPEK EVRKVFGGLF
501: KQETIYIDDD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.