Factsheet for Os05t0291700-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G256400.2	Wheat	plastid	75.56	75.1
TraesCS3D01G256700.2	Wheat	plastid	74.75	74.3
TraesCS3B01G289600.2	Wheat	plastid	74.75	74.3
OQU77706	Sorghum	plastid	53.74	71.51
Zm00001d009877_P001	Maize	plastid	69.7	69.56
HORVU3Hr1G065580.2	Barley	mitochondrion	27.27	58.44
OQU77707	Sorghum	cytosol, mitochondrion, nucleus	19.6	58.43
GSMUA_Achr10P...	Banana	mitochondrion	55.76	52.67
KRH24736	Soybean	nucleus, plastid	54.55	52.63
KRH29743	Soybean	plastid	53.94	51.74
VIT_06s0004g05230.t01	Wine grape	plastid	53.33	51.16
PGSC0003DMT400005492	Potato	plastid	50.71	50.71
CDX68407	Canola	plastid	51.11	50.6
Solyc06g005710.2.1	Tomato	plastid	50.51	50.4
Bra033802.1-P	Field mustard	plastid	50.91	49.32
AT3G46780.1	Thale cress	plastid	50.71	49.22
CDX83004	Canola	plastid	50.71	49.12

Protein Annotations

MapMan:15.6.1.2.3.6	Gene3D:3.40.50.720	EntrezGene:4338302	UniProt:A0A0P0WKD6	ProteinID:BAS93167.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0007623	GO:GO:0008150	GO:GO:0008270	GO:GO:0009295	GO:GO:0009507
GO:GO:0009508	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009941
GO:GO:0016020	GO:GO:0042644	GO:GO:0098572	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os05g0291700
EnsemblPlants:Os05t0291700-02	PFAM:PF13460	PANTHER:PTHR14194	PANTHER:PTHR14194:SF38	SUPFAM:SSF51735	UniParc:UPI00018EFA95
RefSeq:XP_015640848.1	SEG:seg	:	:	:	:

Description

Similar to PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE18); binding / catalytic. (Os05t0291700-01);Similar to cDNA clone:002-143-C11, full insert sequence. (Os05t0291700-02);NAD(P)-binding domain containing protein. (Os05t0291700-03)

Coordinates

chr5:-:12833493..12839337

Molecular Weight (calculated)

52348.4 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.333

Length

495 amino acids

Sequence
(BLAST)

001: MPPALTSNPP SFRPLSTPLT RRRAATTFLC RVGPGKPSKD TGADDEPKKR SFFADFGKLS DGRSLIPAFP PAAAGSLFAG GRGRKDPQTV FVAGATGQAG
101: VRIAQTLLRQ GFAVRAGVPD LASAQELARL ASAYRLISPT EARRLNAVES DFEDPEAIAK SIGPATKVVV TVGAAEKGPD GGVVTTDEAL RVVQAADLAG
201: VTHVVVVYDL GAGDPSGEST YNVLDGFTSF FSNLFSRVQS LPLNEFLAKV VETDVRYTLI KTSLTDDYSP ESTYGLVLAK EGASSTTSST ETGKVSKLQI
301: AGLVADVFSN VAVAENKVVQ VSTSSSVTSK TIEEAFSAIP EDSRRKEYQD AVAKAQAEEE TRASQRTRQA EEDTTTVKAG GKKTPSDEAA ASEAQASLEN
401: LLSRAKGFGT DFSWEKLSTQ LAGVATQDSD EVEPKAQIAT VRGQAKAKKL APQRAVVKPA AQKTRPTPKQ PESKPDVRPV FGGLFKQETI FVDED

Best Arabidopsis Sequence Match ( AT3G46780.1 )
(BLAST)

001: MASSSTSFPL TTAPPQGVRF NRRKPRLTVW AKQTAFQLGK TKGDDDSEGK QKGKNPFQFD FGKLPDMKSL IPVVTNPSTG LVFGNNRKKD PGTIFVAGAT
101: GQAGIRIAQT LLQRGFSVRA GVPDLGAAQD LARVAATYKI LSNDEVKRLN AVQSPFQDAE SIAKAIGNAT KVVVTVGATE NGPDAQVSTS DALLVVQAAE
201: LAGVSHVAIV YDGTISGSTY NVLDGITSFF GNLFAKSQPL TISDLIEKVA QTDVAYTLIK TSLTEDFSPE KAYNVVVSAE GSNSGSGSSS SEAYKVPKLK
301: IASLVADIFA NTAVAENKVV EVSTDPSAPS RPVDELFSVI PEDGRRKVYA DAIARERAEE EAKVAADKAR EAAEAAKEFE KQMQKLSEKE AEAASLAEDA
401: QQKADAVGVT VDGLFNKAKD ISSGLSWNKL GSQFATAIQN ASETPKVQVA TVRGQAKARN LPPKKAVVKQ RPSSPFASKP KEERPKKPEK EVRKVFGGLF
501: KQETIYIDDD

Arabidopsis Description

PTAC16Protein plastid transcriptionally active 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STF2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.