Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g005710.2.1 | Tomato | plastid | 95.35 | 95.16 |
| VIT_06s0004g05230.t01 | Wine grape | plastid | 65.86 | 63.18 |
| KRH29743 | Soybean | plastid | 63.23 | 60.66 |
| KRH24736 | Soybean | nucleus, plastid | 61.21 | 59.06 |
| AT3G46780.1 | Thale cress | plastid | 60.4 | 58.63 |
| CDX68407 | Canola | plastid | 58.79 | 58.2 |
| Bra033802.1-P | Field mustard | plastid | 60.0 | 58.12 |
| CDX83004 | Canola | plastid | 59.8 | 57.93 |
| GSMUA_Achr10P... | Banana | mitochondrion | 55.15 | 52.1 |
| Os05t0291700-02 | Rice | plastid | 50.71 | 50.71 |
| TraesCS3D01G256700.2 | Wheat | plastid | 49.29 | 49.0 |
| TraesCS3A01G256400.2 | Wheat | plastid | 49.29 | 49.0 |
| TraesCS3B01G289600.2 | Wheat | plastid | 49.29 | 49.0 |
| Zm00001d009877_P001 | Maize | plastid | 48.48 | 48.39 |
| OQU77706 | Sorghum | plastid | 36.16 | 48.12 |
| HORVU3Hr1G065580.2 | Barley | mitochondrion | 17.78 | 38.1 |
| OQU77707 | Sorghum | cytosol, mitochondrion, nucleus | 12.53 | 37.35 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400005492 | EnsemblPlantsGene:PGSC0003DMG400002146 | EntrezGene:102588617 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf |
| ncoils:Coil | PANTHER:PTHR14194 | PANTHER:PTHR14194:SF38 | PFAM:PF13460 | PGSC:PGSC0003DMG400002146 | RefSeq:XP_006358702.1 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000296B801 | UniProt:M0ZPZ4 | MapMan:15.6.1.2.3.6 | : |
Description
PTAC16 [Source:PGSC_GENE;Acc:PGSC0003DMG400002146]
Coordinates
chr6:-:4418689..4422502
Molecular Weight (calculated)
52564.8 Da
IEP (calculated)
9.511
GRAVY (calculated)
-0.345
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTLTSNSF LLSTTPHPRL SFKNPRFTVS AKKSGQNQET TNNSGNPFNF DFGKLPDVTS LIPASTNTSS GLSFGRQRAK DPGTVFVAGA TGQAGIRIAQ
101: LLLREGYSVR AGVSDLGAAQ ELARLAVSYK VISNDESKRL NAVASTFQDA ESIAKAIGNA SKVVVTIGKG ENGPATEVTT TDAVQVIQAA QLAGVGHVAI
201: VYDESSSGGS TYNVLDGITS FFNNLFSKSQ PLTIAEFLQK IVETDLSYTL IKTKLTEDFS PESSYKIVVS AEGSAGADAY KVGKSQIAKL VVDVFSNTAV
301: AENKVVEVFA DPSAPSKTVD ELFSVIPEDG RRKAYAEALE KSKAEVEARG AAEASKRQEQ EAKKLEKKEA KAAASIAKEP EEKASSPSIP SVESLLDKAK
401: GLSTGFSFEK FSSQLKSAVE KANEESDAQV ATVRGRAKAK NLPAQKAVVK TPPRNPFASK TKEAPKPAKQ TEVAATEKRK IFGGLFQQET IYVDD
101: LLLREGYSVR AGVSDLGAAQ ELARLAVSYK VISNDESKRL NAVASTFQDA ESIAKAIGNA SKVVVTIGKG ENGPATEVTT TDAVQVIQAA QLAGVGHVAI
201: VYDESSSGGS TYNVLDGITS FFNNLFSKSQ PLTIAEFLQK IVETDLSYTL IKTKLTEDFS PESSYKIVVS AEGSAGADAY KVGKSQIAKL VVDVFSNTAV
301: AENKVVEVFA DPSAPSKTVD ELFSVIPEDG RRKAYAEALE KSKAEVEARG AAEASKRQEQ EAKKLEKKEA KAAASIAKEP EEKASSPSIP SVESLLDKAK
401: GLSTGFSFEK FSSQLKSAVE KANEESDAQV ATVRGRAKAK NLPAQKAVVK TPPRNPFASK TKEAPKPAKQ TEVAATEKRK IFGGLFQQET IYVDD
001: MASSSTSFPL TTAPPQGVRF NRRKPRLTVW AKQTAFQLGK TKGDDDSEGK QKGKNPFQFD FGKLPDMKSL IPVVTNPSTG LVFGNNRKKD PGTIFVAGAT
101: GQAGIRIAQT LLQRGFSVRA GVPDLGAAQD LARVAATYKI LSNDEVKRLN AVQSPFQDAE SIAKAIGNAT KVVVTVGATE NGPDAQVSTS DALLVVQAAE
201: LAGVSHVAIV YDGTISGSTY NVLDGITSFF GNLFAKSQPL TISDLIEKVA QTDVAYTLIK TSLTEDFSPE KAYNVVVSAE GSNSGSGSSS SEAYKVPKLK
301: IASLVADIFA NTAVAENKVV EVSTDPSAPS RPVDELFSVI PEDGRRKVYA DAIARERAEE EAKVAADKAR EAAEAAKEFE KQMQKLSEKE AEAASLAEDA
401: QQKADAVGVT VDGLFNKAKD ISSGLSWNKL GSQFATAIQN ASETPKVQVA TVRGQAKARN LPPKKAVVKQ RPSSPFASKP KEERPKKPEK EVRKVFGGLF
501: KQETIYIDDD
101: GQAGIRIAQT LLQRGFSVRA GVPDLGAAQD LARVAATYKI LSNDEVKRLN AVQSPFQDAE SIAKAIGNAT KVVVTVGATE NGPDAQVSTS DALLVVQAAE
201: LAGVSHVAIV YDGTISGSTY NVLDGITSFF GNLFAKSQPL TISDLIEKVA QTDVAYTLIK TSLTEDFSPE KAYNVVVSAE GSNSGSGSSS SEAYKVPKLK
301: IASLVADIFA NTAVAENKVV EVSTDPSAPS RPVDELFSVI PEDGRRKVYA DAIARERAEE EAKVAADKAR EAAEAAKEFE KQMQKLSEKE AEAASLAEDA
401: QQKADAVGVT VDGLFNKAKD ISSGLSWNKL GSQFATAIQN ASETPKVQVA TVRGQAKARN LPPKKAVVKQ RPSSPFASKP KEERPKKPEK EVRKVFGGLF
501: KQETIYIDDD
Arabidopsis Description
PTAC16Protein plastid transcriptionally active 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9STF2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.