Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037327.1-P | Field mustard | cytosol, nucleus, plastid | 75.37 | 76.66 |
| CDY07232 | Canola | cytosol, nucleus, plastid | 75.37 | 76.5 |
| Bra020012.1-P | Field mustard | cytosol | 24.63 | 75.48 |
| VIT_04s0044g01190.t01 | Wine grape | cytosol, nucleus, plastid | 49.26 | 54.93 |
| KRH00469 | Soybean | cytosol | 51.58 | 49.2 |
| KRH40762 | Soybean | cytosol, plasma membrane, plastid | 49.89 | 48.97 |
| Solyc02g080650.2.1 | Tomato | cytosol, nucleus, peroxisome | 49.47 | 47.57 |
| PGSC0003DMT400042485 | Potato | cytosol, nucleus, vacuole | 49.68 | 47.11 |
| PGSC0003DMT400071772 | Potato | cytosol | 49.68 | 46.83 |
| GSMUA_Achr8P12020_001 | Banana | cytosol | 41.68 | 41.86 |
| Zm00001d027384_P001 | Maize | cytosol | 37.47 | 38.95 |
| TraesCS4B01G353000.2 | Wheat | cytosol | 38.95 | 38.95 |
| Os03t0118900-01 | Rice | cytosol | 37.89 | 38.88 |
| OQU93372 | Sorghum | cytosol | 37.47 | 38.7 |
| HORVU4Hr1G085740.6 | Barley | cytosol | 38.53 | 38.53 |
| TraesCS4D01G347000.1 | Wheat | cytosol | 38.74 | 38.1 |
| TraesCS5A01G522200.1 | Wheat | cytosol | 38.32 | 37.68 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.2 | EntrezGene:826583 | UniProt:A0A178V4E4 | ProteinID:AAC19301.1 | ProteinID:AEE81841.1 |
| EMBL:AK118272 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT4G00231 | EnsemblPlantsGene:AT4G00231 | RefSeq:AT4G00231 |
| TAIR:AT4G00231 | RefSeq:AT4G00231-TAIR-G | EnsemblPlants:AT4G00231.1 | TAIR:AT4G00231.1 | InterPro:Ataxin-10_domain | EMBL:BT005533 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 |
| GO:GO:0009791 | GO:GO:0009793 | InterPro:IPR011989 | Symbol:MEE50 | RefSeq:NP_567156.1 | UniProt:O81325 |
| ProteinID:OAP01170.1 | PFAM:PF09759 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13255 |
| SUPFAM:SSF48371 | UniParc:UPI000000C693 | SEG:seg | : | : | : |
Description
MEE50MEE50 [Source:UniProtKB/TrEMBL;Acc:A0A178V4E4]
Coordinates
chr4:+:97476..99593
Molecular Weight (calculated)
53176.8 Da
IEP (calculated)
4.533
GRAVY (calculated)
-0.081
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASLPEEVL QPLLHASDLS YSLEDCLKFL LESSKTDSGR SDLASKSILP SILRLLQLLP YPSSRHYLNL SLKVLRNLCA GEVSNQNSFV DHDGSAIVSD
101: LLDSAIADFE TVRFGLQVLA NVVLFGEKRQ RDVWLRFYPE RFLSIAKIRK RETFDPLCMI LYTCVDGSSE IASELCSCQG LTIIAETLRT SSSVGSVEDY
201: WLKLLVSRIC VEDGYFLKLF SKLYEDAENE IFSSEQAFLV RMVSDIANER IGKVSIPKDT ACSILGLFRQ SVDVFDFVSG ERSELPTGST IVDVMGYSLV
301: IIRDACAGGR LEELKEDNKD SGDTVELLLS SGLIELLLDL LSKLDPPTTI KKALNQSPSS SSSSLKPCPY RGFRRDIVSV IGNCAYRRKE VQDEIRERDG
401: LFLMLQQCVT DDENPFLREW GLWCIRNLLE GNPENQEVVA ELEIKGSVDV PQLREIGLRV EIDPKTARPK LVNDT
101: LLDSAIADFE TVRFGLQVLA NVVLFGEKRQ RDVWLRFYPE RFLSIAKIRK RETFDPLCMI LYTCVDGSSE IASELCSCQG LTIIAETLRT SSSVGSVEDY
201: WLKLLVSRIC VEDGYFLKLF SKLYEDAENE IFSSEQAFLV RMVSDIANER IGKVSIPKDT ACSILGLFRQ SVDVFDFVSG ERSELPTGST IVDVMGYSLV
301: IIRDACAGGR LEELKEDNKD SGDTVELLLS SGLIELLLDL LSKLDPPTTI KKALNQSPSS SSSSLKPCPY RGFRRDIVSV IGNCAYRRKE VQDEIRERDG
401: LFLMLQQCVT DDENPFLREW GLWCIRNLLE GNPENQEVVA ELEIKGSVDV PQLREIGLRV EIDPKTARPK LVNDT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.