Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75160 | Canola | cytosol | 53.9 | 26.39 |
| PGSC0003DMT400063939 | Potato | cytoskeleton, cytosol, peroxisome | 39.72 | 22.86 |
| Os06t0208300-01 | Rice | cytosol | 37.59 | 18.21 |
| AT4G08350.1 | Thale cress | nucleus | 65.96 | 8.93 |
| AT2G34210.1 | Thale cress | nucleus | 48.94 | 6.98 |
| GSMUA_Achr3P08080_001 | Banana | cytosol | 47.52 | 6.66 |
| OQU85804 | Sorghum | cytosol | 45.39 | 6.32 |
| TraesCS7D01G169200.1 | Wheat | cytosol | 44.68 | 5.99 |
| EER88041 | Sorghum | nucleus | 43.97 | 5.9 |
| TraesCS7A01G168300.1 | Wheat | nucleus | 43.97 | 5.9 |
| TraesCS7B01G073100.1 | Wheat | cytosol | 43.97 | 5.9 |
| HORVU7Hr1G035280.12 | Barley | cytosol | 43.26 | 5.79 |
| TraesCS6D01G304800.1 | Wheat | nucleus | 41.84 | 5.67 |
| TraesCS6B01G355400.1 | Wheat | nucleus | 40.43 | 5.5 |
| TraesCS6A01G325100.2 | Wheat | nucleus | 40.43 | 5.49 |
| AT5G04290.1 | Thale cress | nucleus | 12.06 | 1.14 |
| Os02t0772000-00 | Rice | nucleus | 0.0 | 0.0 |
| Zm00001d044436_P001 | Maize | extracellular, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:AT4G08360 | EMBL:AY122908 | EnsemblPlants:AT4G08360.1 | EnsemblPlantsGene:AT4G08360 | EntrezGene:826392 | GO:GO:0008150 |
| PANTHER:PTHR11125 | PANTHER:PTHR11125:SF7 | ProteinID:AEE82631.1 | ProteinID:CAB52558.1 | ProteinID:CAB77961.1 | RefSeq:AT4G08360 |
| RefSeq:AT4G08360-TAIR-G | RefSeq:NP_192576.1 | TAIR:AT4G08360 | TAIR:AT4G08360.1 | UniParc:UPI00000A2326 | UniProt:Q9STN2 |
| MapMan:35.1 | : | : | : | : | : |
Description
KOW domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9STN2]
Coordinates
chr4:+:5295756..5297084
Molecular Weight (calculated)
15190.3 Da
IEP (calculated)
4.780
GRAVY (calculated)
-0.016
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQVSGKST KFGKVKITSN NMDHHSCAEE YSDEDVEVRF MPDILVTVHN SEVGVIRDVS DGMCKVSLGS GGEGDTIMVP SSELEIVRPR KSDHVKILGG
101: SYLGLTCKLI GIDGLDAIVK IDGNLDVKIL DLALLAKFVQ P
101: SYLGLTCKLI GIDGLDAIVK IDGNLDVKIL DLALLAKFVQ P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.