Factsheet for AT5G24655.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G24660.1	Thale cress	cytosol, nucleus, plastid	89.13	87.23
Bra009783.1-P	Field mustard	cytosol, nucleus, plastid	83.7	82.8
CDY69515	Canola	cytosol, nucleus, plastid	83.7	82.8
CDX80461	Canola	cytosol, nucleus, plastid	82.61	81.72
CDY05452	Canola	cytosol, nucleus, plastid	82.61	78.35
Bra020466.1-P	Field mustard	nucleus	81.52	77.32
CDY05402	Canola	nucleus	81.52	77.32
AT3G49570.1	Thale cress	cytosol	72.83	69.07
AT3G49580.1	Thale cress	cytosol, nucleus, plastid	59.78	58.51
Solyc03g096780.1.1	Tomato	nucleus	50.0	40.71
PGSC0003DMT400001474	Potato	plastid	51.09	40.17
PGSC0003DMT400001475	Potato	plastid	48.91	38.14
Solyc03g096760.1.1	Tomato	plastid	45.65	37.5
PGSC0003DMT400001476	Potato	plastid	45.65	37.5
KRH53667	Soybean	cytosol, extracellular, nucleus	47.83	36.67
Solyc03g096770.1.1	Tomato	nucleus	45.65	36.52
PGSC0003DMT400069515	Potato	cytosol	44.57	36.28
Solyc06g072990.1.1	Tomato	cytosol, plastid	44.57	35.96
KRH64261	Soybean	nucleus	45.65	34.71
KRH16959	Soybean	nucleus	39.13	30.77
VIT_16s0098g00600.t01	Wine grape	cytosol, nucleus, plastid	43.48	29.2

Protein Annotations

MapMan:35.1	EntrezGene:824119	EntrezGene:832537	EntrezGene:832538	UniProt:A0A178U7L9	EMBL:AB010068
ProteinID:AED93345.1	ProteinID:AED93346.1	ProteinID:AEE78558.1	EMBL:AK118134	EMBL:AK118602	EMBL:AK229590
ArrayExpress:AT5G24655	EnsemblPlantsGene:AT5G24655	RefSeq:AT5G24655	TAIR:AT5G24655	RefSeq:AT5G24655-TAIR-G	EnsemblPlants:AT5G24655.1
TAIR:AT5G24655.1	EMBL:AY086698	EMBL:AY088844	ProteinID:BAB09648.1	EMBL:BT004681	EMBL:BT006123
EMBL:BT008617	EMBL:BT020287	ProteinID:CAB62461.1	ncoils:Coil	GO:GO:0000003	GO:GO:0002229
GO:GO:0005575	GO:GO:0006139	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628
GO:GO:0009651	GO:GO:0009658	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909	GO:GO:0009987
GO:GO:0009991	GO:GO:0010438	GO:GO:0016043	GO:GO:0031347	GO:GO:0033554	GO:GO:0042742
GO:GO:0045893	GO:GO:0047484	GO:GO:0048587	Symbol:LSU4	RefSeq:NP_190526.1	RefSeq:NP_197854.1
RefSeq:NP_568450.1	ProteinID:OAO89928.1	ProteinID:OAO90756.1	ProteinID:OAP02738.1	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR34283	PANTHER:PTHR34283:SF1	UniProt:Q8L8S2	UniParc:UPI00000A3948

Description

LSU4Protein RESPONSE TO LOW SULFUR 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8S2]

Coordinates

chr5:-:8440601..8441364

Molecular Weight (calculated)

10563.4 Da

IEP (calculated)

4.496

GRAVY (calculated)

-0.709

Length

92 amino acids

Sequence
(BLAST)

1: MGKGGNYVMV AASEVEELRQ KNGEMEKAVE EMRKEMLQLW RRTQVAEEAE EHLCSQLAEL EAESLDQARD YHTRIIFLTN QLSRFSSDSA SP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.