Factsheet for AT5G24660.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G24655.1	Thale cress	cytosol	87.23	89.13
Bra009783.1-P	Field mustard	cytosol, nucleus, plastid	86.17	87.1
CDY69515	Canola	cytosol, nucleus, plastid	86.17	87.1
CDX80461	Canola	cytosol, nucleus, plastid	85.11	86.02
CDY05452	Canola	cytosol, nucleus, plastid	85.11	82.47
Bra020466.1-P	Field mustard	nucleus	84.04	81.44
CDY05402	Canola	nucleus	84.04	81.44
AT3G49570.1	Thale cress	cytosol	76.6	74.23
AT3G49580.1	Thale cress	cytosol, nucleus, plastid	64.89	64.89
Solyc03g096780.1.1	Tomato	nucleus	51.06	42.48
PGSC0003DMT400001474	Potato	plastid	50.0	40.17
PGSC0003DMT400069515	Potato	cytosol	46.81	38.94
Solyc03g096760.1.1	Tomato	plastid	45.74	38.39
PGSC0003DMT400001476	Potato	plastid	45.74	38.39
KRH53667	Soybean	cytosol, extracellular, nucleus	48.94	38.33
PGSC0003DMT400001475	Potato	plastid	46.81	37.29
KRH64261	Soybean	nucleus	47.87	37.19
Solyc06g072990.1.1	Tomato	cytosol, plastid	44.68	36.84
Solyc03g096770.1.1	Tomato	nucleus	44.68	36.52
VIT_16s0098g00600.t01	Wine grape	cytosol, nucleus, plastid	43.62	29.93
KRH16959	Soybean	nucleus	37.23	29.91

Protein Annotations

MapMan:35.1	EntrezGene:832538	UniProt:A0A178UAC4	ProteinID:AED93346.1	EMBL:AK118602	ArrayExpress:AT5G24660
EnsemblPlantsGene:AT5G24660	RefSeq:AT5G24660	TAIR:AT5G24660	RefSeq:AT5G24660-TAIR-G	EnsemblPlants:AT5G24660.1	TAIR:AT5G24660.1
EMBL:AY086698	ProteinID:BAB09648.1	EMBL:BT004681	ncoils:Coil	GO:GO:0002229	GO:GO:0006139
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009651	GO:GO:0009658	GO:GO:0009987
GO:GO:0009991	GO:GO:0010438	GO:GO:0016043	GO:GO:0031347	GO:GO:0033554	GO:GO:0042742
GO:GO:0045893	GO:GO:0047484	Symbol:LSU2	RefSeq:NP_197854.1	ProteinID:OAO90756.1	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054
PO:PO:0001185	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR34283	PANTHER:PTHR34283:SF1
UniProt:Q9FIR9	UniParc:UPI000000C424	SEG:seg	:	:	:

Description

LSU2Protein RESPONSE TO LOW SULFUR 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIR9]

Coordinates

chr5:-:8443279..8444101

Molecular Weight (calculated)

10679.6 Da

IEP (calculated)

4.520

GRAVY (calculated)

-0.691

Length

94 amino acids

Sequence
(BLAST)

1: MGKGGNYVTV AASEVDELRR KNGEMEKAVE EMKKEMLQLW RRTQVAEEAE ERLCSQLAEL EAESLDQARD YHSRIIFLMN ELSRLSSDSA SASP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.