Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72593 | Canola | cytosol, plastid | 52.69 | 91.76 |
| Bra016829.1-P | Field mustard | plastid | 80.22 | 80.39 |
| VIT_10s0116g00710.t01 | Wine grape | plastid | 62.37 | 60.8 |
| PGSC0003DMT400029363 | Potato | plastid | 59.57 | 60.35 |
| Solyc10g005320.2.1 | Tomato | plastid | 58.49 | 59.13 |
| KRH27603 | Soybean | mitochondrion | 58.06 | 58.44 |
| Solyc10g018390.1.1 | Tomato | cytosol | 56.56 | 57.8 |
| AT5G54810.1 | Thale cress | plastid | 56.34 | 55.74 |
| AT4G27070.1 | Thale cress | plastid | 56.13 | 54.95 |
| Solyc05g046350.1.1 | Tomato | cytosol, extracellular, plastid | 11.61 | 54.0 |
| Solyc10g018380.1.1 | Tomato | cytosol | 22.58 | 50.24 |
| PGSC0003DMT400074916 | Potato | cytosol | 10.32 | 48.48 |
| AT5G38530.1 | Thale cress | plastid | 22.8 | 20.95 |
| HORVU4Hr1G035330.1 | Barley | plastid | 5.81 | 19.85 |
Protein Annotations
| KEGG:00260+4.2.1.20 | KEGG:00400+4.2.1.20 | EntrezGene:2746023 | Gene3D:3.40.50.1100 | MapMan:50.4.2 | ProteinID:AED93783.1 |
| ArrayExpress:AT5G28237 | EnsemblPlantsGene:AT5G28237 | RefSeq:AT5G28237 | TAIR:AT5G28237 | RefSeq:AT5G28237-TAIR-G | EnsemblPlants:AT5G28237.1 |
| TAIR:AT5G28237.1 | Unigene:At.44247 | UniProt:F4K727 | GO:GO:0000162 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004834 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006568 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009073 | GO:GO:0009987 |
| GO:GO:0016829 | HAMAP:MF_00133 | RefSeq:NP_974844.1 | PFAM:PF00291 | PIRSF:PIRSF001413 | InterPro:PLP-dep |
| PO:PO:0000293 | ScanProsite:PS00168 | PANTHER:PTHR42882 | PANTHER:PTHR42882:SF2 | SUPFAM:SSF53686 | TIGRFAMs:TIGR00263 |
| InterPro:Trp_synth_b_CS | InterPro:Trp_synth_beta | InterPro:Trp_synth_beta/beta-like | InterPro:Trypto_synt_PLP_dependent | UniParc:UPI000034F35F | SEG:seg |
Description
Tryptophan synthase [Source:UniProtKB/TrEMBL;Acc:F4K727]
Coordinates
chr5:-:10207287..10213598
Molecular Weight (calculated)
50647.7 Da
IEP (calculated)
7.040
GRAVY (calculated)
-0.169
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSKIQVRG QPLLRVPARN HRMTHLVVCG VSTKRHHREI NALSSNSGPS LDSVPTRTDK RQFLRGDGNG KFGRFGGKFV PETLMSRLIE LEDEFNFVRC
101: DHEFQEELTT ALRDYVGRET PLYFAERLTE HYKNIVPTIE GGPEIYLKRE DLSHCGSHKI NNALAQAMIS RRLGCSRVVA ATGAGQHGVA TAAACAKLSL
201: ECTVFMGAAD IEKQSFNVLS MKLLGAQVIS VEGTFKDASS EAIRNWVENL YTTYYLSGTV VGPHPCPIIV REFQSVIGKE TRRQAKQLWG GKPDVLVACV
301: GSGSNALGLF HEFVGDEDVR LVGVEAAGLG LDSGKHSATL AFGDVGVYHG SMSYLLQDDQ GQILKPHSVG VGLEYPGVGP EISFMKETGR AEFYTATDEE
401: AIQACMRLSR LEGIIPALEA SHALAFLDKL VPTLRDGAKV VVNCSGRGDK DLDTLIQRGM PSSFC
101: DHEFQEELTT ALRDYVGRET PLYFAERLTE HYKNIVPTIE GGPEIYLKRE DLSHCGSHKI NNALAQAMIS RRLGCSRVVA ATGAGQHGVA TAAACAKLSL
201: ECTVFMGAAD IEKQSFNVLS MKLLGAQVIS VEGTFKDASS EAIRNWVENL YTTYYLSGTV VGPHPCPIIV REFQSVIGKE TRRQAKQLWG GKPDVLVACV
301: GSGSNALGLF HEFVGDEDVR LVGVEAAGLG LDSGKHSATL AFGDVGVYHG SMSYLLQDDQ GQILKPHSVG VGLEYPGVGP EISFMKETGR AEFYTATDEE
401: AIQACMRLSR LEGIIPALEA SHALAFLDKL VPTLRDGAKV VVNCSGRGDK DLDTLIQRGM PSSFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.