Factsheet for Bra003256.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67664	Canola	plastid	99.76	99.76
CDY51267	Canola	plastid	99.51	99.51
AT3G56940.1	Thale cress	plastid	94.13	94.13
VIT_08s0040g00390.t01	Wine grape	plastid	85.09	86.57
PGSC0003DMT400018519	Potato	plastid	84.11	85.15
Solyc10g077040.1.1	Tomato	plastid	83.86	84.9
Bra014662.1-P	Field mustard	cytosol	24.21	83.9
GSMUA_Achr10P...	Banana	plastid	82.15	82.56
KRG95003	Soybean	plastid	84.84	81.84
KRH66642	Soybean	plastid	83.86	80.9
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.73	80.1
Zm00001d040463_P001	Maize	plastid	79.22	79.8
EES02775	Sorghum	plastid	79.22	79.61
Os01t0279100-01	Rice	plastid	79.22	79.41
Zm00001d008230_P001	Maize	mitochondrion, plastid	78.73	78.92
TraesCS3A01G191700.4	Wheat	plastid	79.46	72.71
TraesCS3D01G194300.1	Wheat	plastid	79.22	71.84
TraesCS3B01G219700.1	Wheat	golgi, plastid	78.97	71.62
HORVU3Hr1G039930.2	Barley	plastid	78.73	71.08
GSMUA_Achr8P05770_001	Banana	plastid	53.55	69.97
Bra007284.1-P	Field mustard	cytosol	96.33	47.07

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	InterPro:AcsF	EnsemblPlantsGene:Bra003256	EnsemblPlants:Bra003256.1	EnsemblPlants:Bra003256.1-P
InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0046872
GO:GO:0048529	GO:GO:0055114	UniProt:M4CGC3	HAMAP:MF_01840	PFAM:PF02915	PANTHER:PTHR31053
PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin	SUPFAM:SSF47240	TIGRFAMs:TIGR02029	UniParc:UPI000254153A	SEG:seg

Description

AT3G56940 (E=3e-217) CRD1, CHL27, ACSF | CRD1 (COPPER RESPONSE DEFECT 1); DNA binding / magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase

Coordinates

chrA07:+:12218974..12220786

Molecular Weight (calculated)

47637.4 Da

IEP (calculated)

8.780

GRAVY (calculated)

-0.327

Length

409 amino acids

Sequence
(BLAST)

001: MAAEMALVKP ISKFASPRLS NPSKYLSGQR FSTVIRMSAT SSPPPPATAT AKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEEEFIALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKQNPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTDFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VIYEKLMAVG KTDDPSFVKN LKKVPLIAGL VSEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.