Factsheet for HORVU3Hr1G039930.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G194300.1	Wheat	plastid	92.94	93.35
TraesCS3B01G219700.1	Wheat	golgi, plastid	92.49	92.9
TraesCS3A01G191700.4	Wheat	plastid	89.18	90.38
Os01t0279100-01	Rice	plastid	80.13	88.97
EES02775	Sorghum	plastid	79.25	88.21
Zm00001d008230_P001	Maize	mitochondrion, plastid	79.03	87.75
Zm00001d040463_P001	Maize	plastid	77.92	86.95
GSMUA_Achr10P...	Banana	plastid	73.51	81.82
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.41	81.59
VIT_08s0040g00390.t01	Wine grape	plastid	71.3	80.35
PGSC0003DMT400018519	Potato	plastid	70.86	79.46
Solyc10g077040.1.1	Tomato	plastid	70.42	78.96
Bra003256.1-P	Field mustard	plastid	71.08	78.73
CDX72094	Canola	plastid	70.86	78.48
CDX67664	Canola	plastid	70.86	78.48
CDY51267	Canola	plastid	70.64	78.24
CDY47386	Canola	cytosol	23.4	77.94
AT3G56940.1	Thale cress	plastid	69.98	77.51
KRG95003	Soybean	plastid	72.19	77.12
KRH66642	Soybean	plastid	71.3	76.18
CDX76019	Canola	cytosol	18.76	72.03
Bra014662.1-P	Field mustard	cytosol	18.76	72.03
GSMUA_Achr8P05770_001	Banana	plastid	49.01	70.93
Bra007284.1-P	Field mustard	cytosol	71.52	38.71
CDY27178	Canola	mitochondrion	71.52	36.0

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	UniProt:A0A287KUJ3	InterPro:AcsF	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009658	GO:GO:0009706	GO:GO:0009941	GO:GO:0009987
GO:GO:0015979	GO:GO:0015995	GO:GO:0016020	GO:GO:0016043	GO:GO:0016491	GO:GO:0031969
GO:GO:0046872	GO:GO:0048529	GO:GO:0055114	GO:GO:1901401	EnsemblPlantsGene:HORVU3Hr1G039930	EnsemblPlants:HORVU3Hr1G039930.2
HAMAP:MF_01840	PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin	SUPFAM:SSF47240
TIGRFAMs:TIGR02029	UniParc:UPI000B48894F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:238598550..238601525

Molecular Weight (calculated)

52088.7 Da

IEP (calculated)

9.345

GRAVY (calculated)

-0.274

Length

453 amino acids

Sequence
(BLAST)

001: VCSQQQLLSC IYAAPSPFPQ TLRSRSALSV THAPRKMASA MELSLLNPAM HHYGIAAKTA SHLPVVPARR ASSGAVRFRV RAAAAAPPAP AAKPGSPKKR
101: GKTEVNESLL TPRFYTTDFD EMEQLFNAEI NKQLNQDEFD ALLQEFKTDY NQTHFIRNPE FKEAADKMQG PLRQIFVEFL ERSCTAEFSG FLLYKELGRR
201: LKKTNPVVAE IFSLMSRDEA RHAGFLNKGL SDFNLALDLG FLTKARKYTF FKPKFIFYAT YLSEKIGYWR YITIFRHLKA NPEYQVYPIF KYFENWCQDE
301: NRHGDFFSAL LKAQPQFLND WKAKLWSRFF CLSVYITMYL NDCQRSAFYE GIGLNTKEFD MHVIYETNRT TARIFPAVPD VENPEFKRKL DRMVDINLKI
401: ISIGESNDLP LVKNLKRVPL IAQLVSEIIA AYLMPPIESG SVDFAEFEPK LVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.