Factsheet for Zm00001d008230_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	plastid
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040463_P001	Maize	plastid	95.1	95.57
Os01t0279100-01	Rice	plastid	90.93	90.93
GSMUA_Achr10P...	Banana	plastid	83.33	83.54
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.11	83.33
VIT_08s0040g00390.t01	Wine grape	plastid	81.13	82.34
PGSC0003DMT400018519	Potato	plastid	81.37	82.18
Solyc10g077040.1.1	Tomato	plastid	80.88	81.68
CDY47386	Canola	cytosol	27.21	81.62
TraesCS3A01G191700.4	Wheat	plastid	88.24	80.54
TraesCS3D01G194300.1	Wheat	plastid	88.24	79.82
TraesCS3B01G219700.1	Wheat	golgi, plastid	88.24	79.82
CDX72094	Canola	plastid	79.9	79.71
KRG95003	Soybean	plastid	82.6	79.48
AT3G56940.1	Thale cress	plastid	79.66	79.46
HORVU3Hr1G039930.2	Barley	plastid	87.75	79.03
Bra003256.1-P	Field mustard	plastid	78.92	78.73
CDY51267	Canola	plastid	78.92	78.73
KRH66642	Soybean	plastid	81.62	78.54
CDX67664	Canola	plastid	78.68	78.48
CDX76019	Canola	cytosol	21.32	73.73
Bra014662.1-P	Field mustard	cytosol	21.32	73.73
GSMUA_Achr8P05770_001	Banana	plastid	55.64	72.52
Bra007284.1-P	Field mustard	cytosol	80.15	39.07
CDY27178	Canola	mitochondrion	80.15	36.33

Protein Annotations

KEGG:00860+1.14.13.81	EntrezGene:103634652	MapMan:7.12.6.3.1	ProteinID:AQK89239.1	InterPro:AcsF	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0046872	GO:GO:0048529
GO:GO:0055114	UniProt:K7USR3	HAMAP:MF_01840	PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2
InterPro:Rubrerythrin	SUPFAM:SSF47240	TIGRFAMs:TIGR02029	UniParc:UPI000220A78E	EnsemblPlantsGene:Zm00001d008230	EnsemblPlants:Zm00001d008230_P001
EnsemblPlants:Zm00001d008230_T001	SEG:seg	:	:	:	:

Description

Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase chloroplastic

Coordinates

chr8:+:2034108..2036318

Molecular Weight (calculated)

47222.9 Da

IEP (calculated)

9.111

GRAVY (calculated)

-0.258

Length

408 amino acids

Sequence
(BLAST)

001: MASAMELSLL NPAATHRHRG GLAGLPLARR SVVRFRVSAS AAAAAPPKSS GPKKRGKTEI QETLLTPRFY TTDFDEMERL FNAEINKQLN QAEFDALLQE
101: FKTDYNQTHF VRNPEFKAAA DRMEGPLRQI FVEFLERSCT AEFSGFLLYK ELGRRLKKTN PVVAEIFSLM SRDEARHAGF LNKGLSDFNL ALDLGFLTKA
201: RKYTFFKPKF IFYATYLSEK IGYWRYITIF RHLKANPEYQ VYPIFKYFEN WCQDENRHGD FFSALLKAQP QFLNDWKAKL WSRFFCLSVY VTMYLNDCQR
301: TAFYEGIGLD TKEFDMHVII ETNRTTARIF PAVLDVENPE FKRKLDRMVE INQKIIAVGE SDEIPLVKNL KRIPLVASLV SEIIAAYLMP PIESGSVDFA
401: EFEPRLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.