Factsheet for GSMUA_Achr3P25050_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plastid	88.56	87.47
VIT_08s0040g00390.t01	Wine grape	plastid	82.84	82.84
Os01t0279100-01	Rice	plastid	83.83	82.6
EES02775	Sorghum	plastid	83.58	82.56
Zm00001d008230_P001	Maize	mitochondrion, plastid	83.33	82.11
Zm00001d040463_P001	Maize	plastid	82.09	81.28
PGSC0003DMT400018519	Potato	plastid	81.59	81.19
Solyc10g077040.1.1	Tomato	plastid	81.09	80.69
CDY47386	Canola	cytosol	27.11	80.15
CDX72094	Canola	plastid	80.6	79.22
Bra003256.1-P	Field mustard	plastid	80.1	78.73
CDX67664	Canola	plastid	79.85	78.48
KRG95003	Soybean	plastid	82.59	78.3
KRH66642	Soybean	plastid	82.59	78.3
CDY51267	Canola	plastid	79.6	78.24
AT3G56940.1	Thale cress	plastid	79.35	78.0
TraesCS3A01G191700.4	Wheat	plastid	81.34	73.15
TraesCS3D01G194300.1	Wheat	plastid	81.34	72.51
HORVU3Hr1G039930.2	Barley	plastid	81.59	72.41
TraesCS3B01G219700.1	Wheat	golgi, plastid	81.09	72.28
CDX76019	Canola	cytosol	21.14	72.03
Bra014662.1-P	Field mustard	cytosol	21.14	72.03
GSMUA_Achr8P05770_001	Banana	plastid	55.97	71.89
Bra007284.1-P	Field mustard	cytosol	80.85	38.83
CDY27178	Canola	mitochondrion	80.85	36.11

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	InterPro:AcsF	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015979
GO:GO:0015995	GO:GO:0016491	GO:GO:0046872	GO:GO:0048529	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G25050_001
EnsemblPlants:GSMUA_Achr3P25050_001	EnsemblPlants:GSMUA_Achr3T25050_001	UniProt:M0SHM1	HAMAP:MF_01840	PFAM:PF02915	PANTHER:PTHR31053
PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin	SUPFAM:SSF47240	TIGRFAMs:TIGR02029	UniParc:UPI0002957179	SEG:seg

Description

Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G25050_001]

Coordinates

chr3:-:25379331..25381531

Molecular Weight (calculated)

46692.3 Da

IEP (calculated)

8.789

GRAVY (calculated)

-0.257

Length

402 amino acids

Sequence
(BLAST)

001: MNNKKNKIFG LDVLGLFYQL AALGPRCSRF RVMASSQPGA ATATPKKKAG KSEIKETLLA PRFYTTDFDE MEQLFNTEIN KNLNQTEFEA LLNEFKTDYN
101: QTHFVRNPEF KEAADKMQGP LRKIFVEFLE RSCTAEFSGF LLYKELGRRL KKTNPVVAEI FSLMSRDEAR HAGFLNKGLS DFNLALDLGF LTKARKYTFF
201: KPKFIFYATY LSEKIGYWRY ITIYRHLKAN PEFQVYPIFK YFENWCQDEN RHGDFFSALL KAQPQFLNDW KAKLWSRFFC LSVYVTMYLN DCQRTAFYEG
301: IGLDTKEFDM HVIIETNRTT ARIFPAVLDV ENPEFKRKLD TMVEINQKLI AVGESQEIAV VKNLKRIPLI AALVSELVAA YLMPPVESGS VDFADFEPQI
401: VY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.