CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040463_P001	Maize	plastid	94.84	95.07
Os01t0279100-01	Rice	plastid	92.14	91.91
GSMUA_Achr10P...	Banana	plastid	84.03	84.03
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.56	83.58
CDY47386	Canola	cytosol	27.76	83.09
VIT_08s0040g00390.t01	Wine grape	plastid	81.57	82.59
PGSC0003DMT400018519	Potato	plastid	81.57	82.18
Solyc10g077040.1.1	Tomato	plastid	81.08	81.68
TraesCS3A01G191700.4	Wheat	plastid	88.7	80.76
CDX72094	Canola	plastid	80.59	80.2
TraesCS3D01G194300.1	Wheat	plastid	88.7	80.04
TraesCS3B01G219700.1	Wheat	golgi, plastid	88.45	79.82
AT3G56940.1	Thale cress	plastid	79.85	79.46
HORVU3Hr1G039930.2	Barley	plastid	88.21	79.25
Bra003256.1-P	Field mustard	plastid	79.61	79.22
KRG95003	Soybean	plastid	82.31	79.01
CDX67664	Canola	plastid	79.36	78.97
CDY51267	Canola	plastid	79.12	78.73
KRH66642	Soybean	plastid	81.08	77.83
CDX76019	Canola	cytosol	21.87	75.42
Bra014662.1-P	Field mustard	cytosol	21.87	75.42
GSMUA_Achr8P05770_001	Banana	plastid	56.02	72.84
Bra007284.1-P	Field mustard	cytosol	80.84	39.31
CDY27178	Canola	mitochondrion	80.84	36.56

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	EntrezGene:8074544	InterPro:AcsF	UniProt:C5XHA9	EnsemblPlants:EES02775
ProteinID:EES02775	ProteinID:EES02775.1	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0009658	GO:GO:0009706	GO:GO:0009941	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995
GO:GO:0016020	GO:GO:0016043	GO:GO:0016491	GO:GO:0046872	GO:GO:0048529	GO:GO:0055114
GO:GO:1901401	HAMAP:MF_01840	PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin
EnsemblPlantsGene:SORBI_3003G132100	SUPFAM:SSF47240	unigene:Sbi.3637	TIGRFAMs:TIGR02029	UniParc:UPI0001A84F7C	RefSeq:XP_002457655.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:12428620..12431308

Molecular Weight (calculated)

47077.8 Da

IEP (calculated)

9.108

GRAVY (calculated)

-0.227

Length

407 amino acids

Sequence
(BLAST)

001: MAASAMELSL LNPAATHRHL GGLPLARRSV VRFRRVSASA AAAAPPKSSG PKKRGKTEIQ ETLLTPRFYT TDFDEMERLF NAEINKQLNQ AEFDALLQEF
101: KTDYNQTHFV RNPEFKAAAD KMEGPLRQIF VEFLERSCTA EFSGFLLYKE LGRRLKKTNP VVAEIFSLMS RDEARHAGFL NKGLSDFNLA LDLGFLTKAR
201: KYTFFKPKFI FYATYLSEKI GYWRYITIFR HLKANPEYQV YPIFKYFENW CQDENRHGDF FSALLKAQPQ FLNDWKAKLW SRFFCLSVYV TMYLNDCQRT
301: AFYEGIGLDT KEFDMHVIIE TNRTTARIFP AVLDVENPEF KRKLDRMVVI NQKIIAIGES DDIPLVKNLK RIPLIAALVS EIIAAYLMPP IESGSVDFAE
401: FEPQLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.