CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95003	Soybean	plastid	94.1	94.1
VIT_08s0040g00390.t01	Wine grape	plastid	81.13	85.57
PGSC0003DMT400018519	Potato	plastid	81.13	85.15
Solyc10g077040.1.1	Tomato	plastid	80.9	84.9
Bra003256.1-P	Field mustard	plastid	80.9	83.86
CDX72094	Canola	plastid	80.9	83.86
CDY51267	Canola	plastid	80.9	83.86
CDX67664	Canola	plastid	80.66	83.62
AT3G56940.1	Thale cress	plastid	80.42	83.37
CDY47386	Canola	cytosol	26.65	83.09
GSMUA_Achr10P...	Banana	plastid	79.72	83.05
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.3	82.59
Zm00001d040463_P001	Maize	plastid	78.77	82.27
Zm00001d008230_P001	Maize	mitochondrion, plastid	78.54	81.62
Os01t0279100-01	Rice	plastid	78.3	81.37
EES02775	Sorghum	plastid	77.83	81.08
CDX76019	Canola	cytosol	20.99	75.42
Bra014662.1-P	Field mustard	cytosol	20.99	75.42
GSMUA_Achr8P05770_001	Banana	plastid	53.07	71.89
TraesCS3A01G191700.4	Wheat	plastid	75.47	71.59
HORVU3Hr1G039930.2	Barley	plastid	76.18	71.3
TraesCS3D01G194300.1	Wheat	plastid	75.71	71.18
TraesCS3B01G219700.1	Wheat	golgi, plastid	75.47	70.95
Bra007284.1-P	Field mustard	cytosol	81.84	41.46
CDY27178	Canola	mitochondrion	81.84	38.56

Protein Annotations

KEGG:00860+1.14.13.81	EntrezGene:100805393	MapMan:7.12.6.3.1	EMBL:ACUP02001998	InterPro:AcsF	InterPro:Ferritin-like_SF
EnsemblPlantsGene:GLYMA_03G119500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0046872
GO:GO:0048529	GO:GO:0055114	UniProt:I1JMX7	EnsemblPlants:KRH66642	ProteinID:KRH66642	ProteinID:KRH66642.1
HAMAP:MF_01840	PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin	SUPFAM:SSF47240
TIGRFAMs:TIGR02029	UniParc:UPI0002339A7F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:33054914..33058066

Molecular Weight (calculated)

49066.1 Da

IEP (calculated)

8.410

GRAVY (calculated)

-0.265

Length

424 amino acids

Sequence
(BLAST)

001: MLLLSPPQPQ LQPFFTSLHM AALVKPISNV TPKFVSSPRM GSSHSSKFST IIRMSATATP PPSTSTKPAS SKKGNIKETL LTPRFYTTDF DEMETLFNTE
101: INKNLNQDEF EALLQEFKTD YNQTHFVRNK EFKEAADKLE GPLRQIFVEF LERSCTAEFS GFLLYKELGR RLKKTNPVVA EIFSLMSRDE ARHAGFLNKG
201: LSDFNLALDL GFLTKARKYT FFKPKFIFYA TYLSEKIGYW RYITIYRHLK ANPEFQCYPI FKYFENWCQD ENRHGDFFSA LMKAQPQFLN DWKAKLWSRF
301: FCLSVYVTMY LNDCQRTAFY EGIGLNTKEF DMHVIIETNR TTARIFPAVL DVENPEFKRK LDRMVEINEK LVAVGESDDI AVVKNLKRIP LVAALVSELL
401: ATYLMPPIES GSVDLAEFEP QLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.