Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra014662.1-P | Field mustard | cytosol | 100.0 | 100.0 |
CDY47386 | Canola | cytosol | 91.53 | 79.41 |
CDX72094 | Canola | plastid | 87.29 | 25.18 |
CDX67664 | Canola | plastid | 83.05 | 23.96 |
CDY51267 | Canola | plastid | 83.05 | 23.96 |
VIT_08s0040g00390.t01 | Wine grape | plastid | 77.12 | 22.64 |
AT3G56940.1 | Thale cress | plastid | 77.12 | 22.25 |
EES02775 | Sorghum | plastid | 75.42 | 21.87 |
GSMUA_Achr10P... | Banana | plastid | 74.58 | 21.62 |
Zm00001d040463_P001 | Maize | plastid | 73.73 | 21.43 |
Zm00001d008230_P001 | Maize | mitochondrion, plastid | 73.73 | 21.32 |
GSMUA_Achr3P25050_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.03 | 21.14 |
Os01t0279100-01 | Rice | plastid | 72.88 | 21.08 |
KRH66642 | Soybean | plastid | 75.42 | 20.99 |
PGSC0003DMT400018519 | Potato | plastid | 71.19 | 20.79 |
Solyc10g077040.1.1 | Tomato | plastid | 71.19 | 20.79 |
KRG95003 | Soybean | plastid | 74.58 | 20.75 |
GSMUA_Achr8P05770_001 | Banana | plastid | 52.54 | 19.81 |
TraesCS3A01G191700.4 | Wheat | plastid | 72.03 | 19.02 |
TraesCS3D01G194300.1 | Wheat | plastid | 72.03 | 18.85 |
HORVU3Hr1G039930.2 | Barley | plastid | 72.03 | 18.76 |
TraesCS3B01G219700.1 | Wheat | golgi, plastid | 71.19 | 18.63 |
CDY27178 | Canola | mitochondrion | 87.29 | 11.44 |
Protein Annotations
EnsemblPlants:CDX76019 | EnsemblPlantsGene:GSBRNA2T00126243001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0015995 | GO:GO:0046872 |
GO:GO:0048529 | InterPro:AcsF | KEGG:00860+1.14.13.81 | PANTHER:PTHR31053 | PANTHER:PTHR31053:SF2 | ProteinID:CDX76019 |
ProteinID:CDX76019.1 | UniParc:UPI000254476E | MapMan:35.1 | : | : | : |
Description
BnaA04g02830D
Coordinates
chrLK031806:+:241854..242401
Molecular Weight (calculated)
13103.9 Da
IEP (calculated)
4.849
GRAVY (calculated)
0.020
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGKPSSGLV SSTSQYIGLN TKEFDMHVII ETNRTTARIF PAVLDVENPE FKRKLDRMVV INEKLMAVGQ TDDPSFVKNL KRIPLIAGLV SEILAAYLMP
101: PVESGSVDFA EFEPNLVY
101: PVESGSVDFA EFEPNLVY
001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY
Arabidopsis Description
CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.