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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014662.1-P Field mustard cytosol 100.0 100.0
CDY47386 Canola cytosol 91.53 79.41
CDX72094 Canola plastid 87.29 25.18
CDX67664 Canola plastid 83.05 23.96
CDY51267 Canola plastid 83.05 23.96
VIT_08s0040g00390.t01 Wine grape plastid 77.12 22.64
AT3G56940.1 Thale cress plastid 77.12 22.25
EES02775 Sorghum plastid 75.42 21.87
GSMUA_Achr10P... Banana plastid 74.58 21.62
Zm00001d040463_P001 Maize plastid 73.73 21.43
Zm00001d008230_P001 Maize mitochondrion, plastid 73.73 21.32
GSMUA_Achr3P25050_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 72.03 21.14
Os01t0279100-01 Rice plastid 72.88 21.08
KRH66642 Soybean plastid 75.42 20.99
PGSC0003DMT400018519 Potato plastid 71.19 20.79
Solyc10g077040.1.1 Tomato plastid 71.19 20.79
KRG95003 Soybean plastid 74.58 20.75
GSMUA_Achr8P05770_001 Banana plastid 52.54 19.81
TraesCS3A01G191700.4 Wheat plastid 72.03 19.02
TraesCS3D01G194300.1 Wheat plastid 72.03 18.85
HORVU3Hr1G039930.2 Barley plastid 72.03 18.76
TraesCS3B01G219700.1 Wheat golgi, plastid 71.19 18.63
CDY27178 Canola mitochondrion 87.29 11.44
Protein Annotations
EnsemblPlants:CDX76019EnsemblPlantsGene:GSBRNA2T00126243001GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0015979GO:GO:0015995GO:GO:0046872
GO:GO:0048529InterPro:AcsFKEGG:00860+1.14.13.81PANTHER:PTHR31053PANTHER:PTHR31053:SF2ProteinID:CDX76019
ProteinID:CDX76019.1UniParc:UPI000254476EMapMan:35.1:::
Description
BnaA04g02830D
Coordinates
chrLK031806:+:241854..242401
Molecular Weight (calculated)
13103.9 Da
IEP (calculated)
4.849
GRAVY (calculated)
0.020
Length
118 amino acids
Sequence
(BLAST)
001: MTGKPSSGLV SSTSQYIGLN TKEFDMHVII ETNRTTARIF PAVLDVENPE FKRKLDRMVV INEKLMAVGQ TDDPSFVKNL KRIPLIAGLV SEILAAYLMP
101: PVESGSVDFA EFEPNLVY
Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)
001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY
Arabidopsis Description
CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.