Factsheet for Bra014662.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76019	Canola	cytosol	100.0	100.0
Bra003256.1-P	Field mustard	plastid	83.9	24.21
VIT_08s0040g00390.t01	Wine grape	plastid	77.12	22.64
AT3G56940.1	Thale cress	plastid	77.12	22.25
EES02775	Sorghum	plastid	75.42	21.87
GSMUA_Achr10P...	Banana	plastid	74.58	21.62
Zm00001d040463_P001	Maize	plastid	73.73	21.43
Zm00001d008230_P001	Maize	mitochondrion, plastid	73.73	21.32
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.03	21.14
Os01t0279100-01	Rice	plastid	72.88	21.08
KRH66642	Soybean	plastid	75.42	20.99
PGSC0003DMT400018519	Potato	plastid	71.19	20.79
Solyc10g077040.1.1	Tomato	plastid	71.19	20.79
KRG95003	Soybean	plastid	74.58	20.75
GSMUA_Achr8P05770_001	Banana	plastid	52.54	19.81
TraesCS3A01G191700.4	Wheat	plastid	72.03	19.02
TraesCS3D01G194300.1	Wheat	plastid	72.03	18.85
HORVU3Hr1G039930.2	Barley	plastid	72.03	18.76
TraesCS3B01G219700.1	Wheat	golgi, plastid	71.19	18.63
Bra007284.1-P	Field mustard	cytosol	87.29	12.31

Protein Annotations

EnsemblPlants:Bra014662.1	EnsemblPlants:Bra014662.1-P	EnsemblPlantsGene:Bra014662	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995
GO:GO:0046872	GO:GO:0048529	GO:GO:0055114	InterPro:AcsF	KEGG:00860+1.14.13.81	PANTHER:PTHR31053
PANTHER:PTHR31053:SF2	UniParc:UPI000254476E	UniProt:M4DDU3	MapMan:35.1	:	:

Description

AT3G56940 (E=3e-047) CRD1, CHL27, ACSF | CRD1 (COPPER RESPONSE DEFECT 1); DNA binding / magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase

Coordinates

chrA04:-:2092069..2092616

Molecular Weight (calculated)

13103.9 Da

IEP (calculated)

4.849

GRAVY (calculated)

0.020

Length

118 amino acids

Sequence
(BLAST)

001: MTGKPSSGLV SSTSQYIGLN TKEFDMHVII ETNRTTARIF PAVLDVENPE FKRKLDRMVV INEKLMAVGQ TDDPSFVKNL KRIPLIAGLV SEILAAYLMP
101: PVESGSVDFA EFEPNLVY

Best Arabidopsis Sequence Match ( AT3G56940.2 )
(BLAST)

001: MEQLFNTEIN KNLNEAEFEA LLQEFKTDYN QTHFVRNKEF KEAADKLQGP LRQIFVEFLE RSCTAEFSGF LLYKELGRRL KKTNPVVAEI FSLMSRDEAR
101: HAGFLNKGLS DFNLALDLGF LTKARKYTFF KPKFIFYATY LSEKIGYWRY ITIYRHLKEN PEFQCYPIFK YFENWCQDEN RHGDFFSALM KAQPQFLNDW
201: QAKLWSRFFC LSVYVTMYLN DCQRTNFYEG IGLNTKEFDM HVIIETNRTT ARIFPAVLDV ENPEFKRKLD RMVVSYEKLL AIGETDDASF IKTLKRIPLV
301: TSLASEILAA YLMPPVESGS VDFAEFEPNL VY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.