Factsheet for Os01t0279100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

nucleus: 19621931
plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02775	Sorghum	plastid	91.91	92.14
Zm00001d040463_P001	Maize	plastid	91.18	91.63
Zm00001d008230_P001	Maize	mitochondrion, plastid	90.93	90.93
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.6	83.83
GSMUA_Achr10P...	Banana	plastid	83.33	83.54
VIT_08s0040g00390.t01	Wine grape	plastid	81.37	82.59
TraesCS3A01G191700.4	Wheat	plastid	88.97	81.21
PGSC0003DMT400018519	Potato	plastid	80.15	80.94
CDY47386	Canola	cytosol	26.96	80.88
TraesCS3D01G194300.1	Wheat	plastid	88.97	80.49
Solyc10g077040.1.1	Tomato	plastid	79.66	80.45
TraesCS3B01G219700.1	Wheat	golgi, plastid	88.73	80.27
HORVU3Hr1G039930.2	Barley	plastid	88.97	80.13
CDX72094	Canola	plastid	79.66	79.46
KRG95003	Soybean	plastid	82.35	79.25
CDY51267	Canola	plastid	79.41	79.22
Bra003256.1-P	Field mustard	plastid	79.41	79.22
AT3G56940.1	Thale cress	plastid	79.17	78.97
CDX67664	Canola	plastid	79.17	78.97
KRH66642	Soybean	plastid	81.37	78.3
Bra014662.1-P	Field mustard	cytosol	21.08	72.88
CDX76019	Canola	cytosol	21.08	72.88
GSMUA_Achr8P05770_001	Banana	plastid	55.39	72.2
Bra007284.1-P	Field mustard	cytosol	80.15	39.07
CDY27178	Canola	mitochondrion	80.15	36.33

Protein Annotations

KEGG:00860+1.14.13.81	EntrezGene:4326901	MapMan:7.12.6.3.1	EMBL:AK059435	EMBL:AK069333	InterPro:AcsF
ProteinID:BAA87823.1	ProteinID:BAA89564.1	ProteinID:BAF04659.1	ProteinID:BAS71577.1	EMBL:FJ940751	InterPro:Ferritin-like_SF
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009658	GO:GO:0009706
GO:GO:0009941	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016020	GO:GO:0016043
GO:GO:0016491	GO:GO:0036068	GO:GO:0046872	GO:GO:0048529	GO:GO:0055114	GO:GO:1901401
HAMAP:MF_01840	EnsemblPlantsGene:Os01g0279100	EnsemblPlants:Os01t0279100-01	PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2
UniProt:Q9SDJ2	InterPro:Rubrerythrin	SUPFAM:SSF47240	TIGRFAMs:TIGR02029	UniParc:UPI00000AAA69	RefSeq:XP_015622109.1
SEG:seg	:	:	:	:	:

Description

PHARBITIS NIL LEUCINE ZIPPERSubunit of magnesium-protoporphyrin IX monomethyl ester cyclase (EC:1.14.13.81), Core component of FLU-YGL8-LCAA-POR complex, Chlorophyll biosynthesis, Chloroplast development (Os01t0279100-01);Similar to Magnesium-protoporphyrin ix monomethyl ester cyclase (Fragment). (Os01t0279100-02)

Coordinates

chr1:+:9874379..9876678

Molecular Weight (calculated)

47304.1 Da

IEP (calculated)

9.101

GRAVY (calculated)

-0.275

Length

408 amino acids

Sequence
(BLAST)

001: MASSAMELSL LNPAAMRGLS AAKPRVVSSR RIVRFRVASS AAAPPAAKPG TPKKRGKTEI QETLLTPRFY TTDFDEMERL FNAEINKQLN QEEFDALLQE
101: FKTDYNQTHF VRNPEFKAAA DKMEGPLRQI FVEFLERSCT AEFSGFLLYK ELGRRLKKTN PVVAEIFSLM SRDEARHAGF LNKGLSDFNL ALDLGFLTKA
201: RKYTFFKPKF IFYATYLSEK IGYWRYITIF RHLKANPEYQ VYPIFKYFEN WCQDENRHGD FFSALLKAQP QFLNDWKAKL WSRFFCLSVY VTMYLNDCQR
301: TTFYEGIGLD TKEFDMHVII ETNRTTARIF PAVLDVENPE FKRKLDRMVE INKKIIAIGE SDDIPLVKNL KRIPHVAALV SEIIAAYLMP PIESGSVDFA
401: EFEPQLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.