Factsheet for Zm00001d040463_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008230_P001	Maize	mitochondrion, plastid	95.57	95.1
EES02775	Sorghum	plastid	95.07	94.84
Os01t0279100-01	Rice	plastid	91.63	91.18
VIT_08s0040g00390.t01	Wine grape	plastid	81.53	82.34
GSMUA_Achr10P...	Banana	plastid	82.51	82.31
PGSC0003DMT400018519	Potato	plastid	81.77	82.18
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.28	82.09
Solyc10g077040.1.1	Tomato	plastid	81.28	81.68
CDY47386	Canola	cytosol	27.34	81.62
KRG95003	Soybean	plastid	83.25	79.72
CDX72094	Canola	plastid	80.3	79.71
AT3G56940.1	Thale cress	plastid	80.05	79.46
TraesCS3A01G191700.4	Wheat	plastid	87.44	79.42
Bra003256.1-P	Field mustard	plastid	79.8	79.22
CDY51267	Canola	plastid	79.8	79.22
CDX67664	Canola	plastid	79.56	78.97
KRH66642	Soybean	plastid	82.27	78.77
TraesCS3B01G219700.1	Wheat	golgi, plastid	87.44	78.71
TraesCS3D01G194300.1	Wheat	plastid	87.44	78.71
HORVU3Hr1G039930.2	Barley	plastid	86.95	77.92
Bra014662.1-P	Field mustard	cytosol	21.43	73.73
CDX76019	Canola	cytosol	21.43	73.73
GSMUA_Achr8P05770_001	Banana	plastid	55.91	72.52
Bra007284.1-P	Field mustard	cytosol	80.79	39.19
CDY27178	Canola	mitochondrion	80.79	36.44

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	UniProt:A0A1D6MQX6	InterPro:AcsF	InterPro:Ferritin-like_SF	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0046872	GO:GO:0048529	GO:GO:0055114
HAMAP:MF_01840	ProteinID:ONM31406.1	PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin
SUPFAM:SSF47240	TIGRFAMs:TIGR02029	UniParc:UPI0008439E63	EnsemblPlantsGene:Zm00001d040463	EnsemblPlants:Zm00001d040463_P001	EnsemblPlants:Zm00001d040463_T001
SEG:seg	:	:	:	:	:

Description

Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase chloroplastic

Coordinates

chr3:-:44744039..44746612

Molecular Weight (calculated)

47078.8 Da

IEP (calculated)

9.255

GRAVY (calculated)

-0.278

Length

406 amino acids

Sequence
(BLAST)

001: MASSAMELSL VNPAATHRHR GGLVGLPLAR RSVVRFRVSA AAAPPKSSGP NKRGKTEIQE TLLTPRFYTT DFDEMERLFN AEINKQLNQA EFDALLQEFK
101: TDYNQTHFVR NPEFKAAADK MEGPHRQIFV EFLERSCTAE FSGFLLYKEL GRRLKKTNPV VAEIFSLMSR DEARHAGFLN KGLSDFNLAL DLGFLTKARK
201: YTFFKPKFIF YATYLSEKIG YWRYITIFRH LKANPEYQVY PIFKYFENWC QDENRHGDFF SALLKAQPQF LNDWKAKLWS RFFCLSVYVT MYLNDCQRTT
301: FYEGIGLNTK EFDMHVIIET NRTTARIFPA VLDVENPEFK RKLDRMVEIN QKIIAIGKSD DIPLVKNMKR IPLVAALVSE IIAAYLMPPI ESGSVDFAEF
401: EPQLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.