CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 7
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66642	Soybean	plastid	94.1	94.1
VIT_08s0040g00390.t01	Wine grape	plastid	81.6	86.07
PGSC0003DMT400018519	Potato	plastid	81.6	85.64
Solyc10g077040.1.1	Tomato	plastid	81.37	85.4
Bra003256.1-P	Field mustard	plastid	81.84	84.84
CDY51267	Canola	plastid	81.84	84.84
CDX67664	Canola	plastid	81.6	84.6
CDX72094	Canola	plastid	81.6	84.6
AT3G56940.1	Thale cress	plastid	81.37	84.35
Zm00001d040463_P001	Maize	plastid	79.72	83.25
GSMUA_Achr10P...	Banana	plastid	79.48	82.8
Zm00001d008230_P001	Maize	mitochondrion, plastid	79.48	82.6
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.3	82.59
CDY47386	Canola	cytosol	26.42	82.35
Os01t0279100-01	Rice	plastid	79.25	82.35
EES02775	Sorghum	plastid	79.01	82.31
CDX76019	Canola	cytosol	20.75	74.58
Bra014662.1-P	Field mustard	cytosol	20.75	74.58
TraesCS3A01G191700.4	Wheat	plastid	76.65	72.71
GSMUA_Achr8P05770_001	Banana	plastid	53.54	72.52
TraesCS3D01G194300.1	Wheat	plastid	76.89	72.28
HORVU3Hr1G039930.2	Barley	plastid	77.12	72.19
TraesCS3B01G219700.1	Wheat	golgi, plastid	76.65	72.06
Bra007284.1-P	Field mustard	cytosol	82.78	41.94
CDY27178	Canola	mitochondrion	82.78	39.0

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	EMBL:ACUP02012068	InterPro:AcsF	InterPro:Ferritin-like_SF	EnsemblPlantsGene:GLYMA_19G123800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0046872	GO:GO:0048529
GO:GO:0055114	UniProt:I1N8L0	EnsemblPlants:KRG95003	ProteinID:KRG95003	ProteinID:KRG95003.1	HAMAP:MF_01840
PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin	SUPFAM:SSF47240	TIGRFAMs:TIGR02029
UniParc:UPI00023DE7B9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:38167742..38170870

Molecular Weight (calculated)

49061.1 Da

IEP (calculated)

7.888

GRAVY (calculated)

-0.274

Length

424 amino acids

Sequence
(BLAST)

001: MLLLSPQPPF FTSLHIAEEM ALVKPISNVT PKFGSSPRMG SHSKFSTIIR MSATATPPPP PSTSTKPAAS NKKGNIKETL LTPRFYTTDF DEMETLFNTE
101: INKNLNQDEF EALLQEFKTD YNQTHFVRNK EFKEAADKLE GPLRQIFVEF LERSCTAEFS GFLLYKELGR RLKKTNPVVA EIFSLMSRDE ARHAGFLNKG
201: LSDFNLALDL GFLTKARKYT FFKPKFIFYA TYLSEKIGYW RYITIYRHLK ANPEFQCYPI FKYFENWCQD ENRHGDFFSA LMKAQPQFLN DWKAKLWSRF
301: FCLSVYVTMY LNDCQRTAFY EGIGLNTKEF DMHVIIETNR TTARIFPAVL DVENPEFKRK LDRMVEINEK IIAVGESDDI AVVKNLKRIP LVAALVSELL
401: ATYLMPPIES GSVDLAEFEP QLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.