CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67664	Canola	plastid	95.11	95.11
CDY51267	Canola	plastid	94.87	94.87
CDY47386	Canola	cytosol	31.3	94.12
AT3G56940.1	Thale cress	plastid	92.67	92.67
CDX76019	Canola	cytosol	25.18	87.29
VIT_08s0040g00390.t01	Wine grape	plastid	84.84	86.32
PGSC0003DMT400018519	Potato	plastid	84.11	85.15
Solyc10g077040.1.1	Tomato	plastid	83.86	84.9
GSMUA_Achr10P...	Banana	plastid	83.13	83.54
KRG95003	Soybean	plastid	84.6	81.6
KRH66642	Soybean	plastid	83.86	80.9
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.22	80.6
EES02775	Sorghum	plastid	80.2	80.59
Zm00001d040463_P001	Maize	plastid	79.71	80.3
Zm00001d008230_P001	Maize	mitochondrion, plastid	79.71	79.9
Os01t0279100-01	Rice	plastid	79.46	79.66
TraesCS3A01G191700.4	Wheat	plastid	79.22	72.48
TraesCS3D01G194300.1	Wheat	plastid	79.22	71.84
TraesCS3B01G219700.1	Wheat	golgi, plastid	78.97	71.62
HORVU3Hr1G039930.2	Barley	plastid	78.48	70.86
GSMUA_Achr8P05770_001	Banana	plastid	53.55	69.97
CDY27178	Canola	mitochondrion	98.53	44.78

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	GO:A0A078C7H0	InterPro:AcsF	EnsemblPlants:CDX72094	ProteinID:CDX72094
ProteinID:CDX72094.1	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016491
GO:GO:0046872	GO:GO:0048529	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00155894001	HAMAP:MF_01840	PFAM:PF02915
PANTHER:PTHR31053	PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin	SUPFAM:SSF47240	TIGRFAMs:TIGR02029	UniParc:UPI0004EDCB34
SEG:seg	:	:	:	:	:

Description

BnaC08g27800D

Coordinates

chrLK031795:-:2369758..2371984

Molecular Weight (calculated)

47787.5 Da

IEP (calculated)

8.511

GRAVY (calculated)

-0.345

Length

409 amino acids

Sequence
(BLAST)

001: MAAEMMLMKP ISKFSSPNLS NSRTCLTNRR FSTVIRMSAT STPPPSATAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEEEFIALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKQNPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTDFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VINEKLMAVG QTDDPSFVKN LKRIPLIAGL VSEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.