CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003256.1-P	Field mustard	plastid	99.51	99.51
CDX67664	Canola	plastid	99.27	99.27
CDX72094	Canola	plastid	94.87	94.87
AT3G56940.1	Thale cress	plastid	94.13	94.13
CDY47386	Canola	cytosol	29.83	89.71
VIT_08s0040g00390.t01	Wine grape	plastid	84.6	86.07
PGSC0003DMT400018519	Potato	plastid	83.62	84.65
Solyc10g077040.1.1	Tomato	plastid	83.37	84.41
CDX76019	Canola	cytosol	23.96	83.05
GSMUA_Achr10P...	Banana	plastid	81.66	82.06
KRG95003	Soybean	plastid	84.84	81.84
KRH66642	Soybean	plastid	83.86	80.9
Zm00001d040463_P001	Maize	plastid	79.22	79.8
GSMUA_Achr3P25050_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.24	79.6
Os01t0279100-01	Rice	plastid	79.22	79.41
EES02775	Sorghum	plastid	78.73	79.12
Zm00001d008230_P001	Maize	mitochondrion, plastid	78.73	78.92
TraesCS3A01G191700.4	Wheat	plastid	78.97	72.26
TraesCS3D01G194300.1	Wheat	plastid	78.73	71.4
TraesCS3B01G219700.1	Wheat	golgi, plastid	78.48	71.18
HORVU3Hr1G039930.2	Barley	plastid	78.24	70.64
GSMUA_Achr8P05770_001	Banana	plastid	53.3	69.65
CDY27178	Canola	mitochondrion	95.84	43.56

Protein Annotations

KEGG:00860+1.14.13.81	MapMan:7.12.6.3.1	GO:A0A078IMW8	UniProt:A0A078IMW8	InterPro:AcsF	EnsemblPlants:CDY51267
ProteinID:CDY51267	ProteinID:CDY51267.1	InterPro:Ferritin-like_SF	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995
GO:GO:0016491	GO:GO:0046872	GO:GO:0048529	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00003039001	HAMAP:MF_01840
PFAM:PF02915	PANTHER:PTHR31053	PANTHER:PTHR31053:SF2	InterPro:Rubrerythrin	SUPFAM:SSF47240	TIGRFAMs:TIGR02029
UniParc:UPI0004EF4543	SEG:seg	:	:	:	:

Description

BnaCnng20460DBnaCnng20460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMW8]

Coordinates

chrLK032979:+:69800..76685

Molecular Weight (calculated)

47683.4 Da

IEP (calculated)

8.889

GRAVY (calculated)

-0.337

Length

409 amino acids

Sequence
(BLAST)

001: MAAEMALVKP ISKFASPRLS NPSKYLSGQR FSTVIRMSAT SSPPPPATAT AKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEEEFIALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKQNPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFYLSV YVTMYLNDCQ
301: RTDFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VIYEKLMAVG KTDDPSFVKN LKKVPLVAGL VSEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Best Arabidopsis Sequence Match ( AT3G56940.1 )
(BLAST)

001: MAAEMALVKP ISKFSSPKLS NPSKFLSGRR FSTVIRMSAS SSPPPPTTAT SKSKKGTKKE IQESLLTPRF YTTDFEEMEQ LFNTEINKNL NEAEFEALLQ
101: EFKTDYNQTH FVRNKEFKEA ADKLQGPLRQ IFVEFLERSC TAEFSGFLLY KELGRRLKKT NPVVAEIFSL MSRDEARHAG FLNKGLSDFN LALDLGFLTK
201: ARKYTFFKPK FIFYATYLSE KIGYWRYITI YRHLKENPEF QCYPIFKYFE NWCQDENRHG DFFSALMKAQ PQFLNDWQAK LWSRFFCLSV YVTMYLNDCQ
301: RTNFYEGIGL NTKEFDMHVI IETNRTTARI FPAVLDVENP EFKRKLDRMV VSYEKLLAIG ETDDASFIKT LKRIPLVTSL ASEILAAYLM PPVESGSVDF
401: AEFEPNLVY

Arabidopsis Description

CRD1Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M591]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.