Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003776.1-P | Field mustard | cytosol | 68.72 | 100.0 |
| CDX73129 | Canola | plastid | 96.21 | 96.21 |
| AT1G74970.1 | Thale cress | plastid | 80.09 | 81.25 |
| VIT_18s0001g11750.t01 | Wine grape | plastid | 74.88 | 75.6 |
| KRH15268 | Soybean | nucleus | 71.09 | 72.46 |
| KRH05768 | Soybean | plastid | 71.09 | 72.46 |
| PGSC0003DMT400043484 | Potato | mitochondrion, plastid | 67.77 | 68.1 |
| GSMUA_Achr2P17190_001 | Banana | plastid | 67.3 | 64.25 |
| EER90823 | Sorghum | plastid | 64.45 | 60.71 |
| Solyc04g079790.2.1 | Tomato | plastid | 67.77 | 60.34 |
| TraesCS5A01G404500.1 | Wheat | plastid | 63.98 | 60.0 |
| TraesCS5D01G414600.1 | Wheat | plastid | 63.51 | 59.56 |
| TraesCS5B01G409400.1 | Wheat | plastid | 63.51 | 59.29 |
| Zm00001d034192_P001 | Maize | plastid | 60.66 | 57.14 |
| Os03t0769100-01 | Rice | plastid | 59.24 | 56.05 |
| HORVU5Hr1G098340.3 | Barley | plastid | 59.24 | 46.99 |
| Bra018009.1-P | Field mustard | mitochondrion | 31.28 | 16.26 |
Protein Annotations
| MapMan:17.7.2.2.9 | Gene3D:3.30.230.10 | EnsemblPlantsGene:Bra015878 | EnsemblPlants:Bra015878.1 | EnsemblPlants:Bra015878.1-P | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0030529 | InterPro:IPR014721 | UniProt:M4DHA1 | HAMAP:MF_00532_B | PFAM:PF00380 |
| ScanProsite:PS00360 | PANTHER:PTHR21569 | PANTHER:PTHR21569:SF11 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | InterPro:Ribosomal_S9 |
| InterPro:Ribosomal_S9_CS | InterPro:Ribosomal_S9_bac/plastid | SUPFAM:SSF54211 | UniParc:UPI0002541EF7 | SEG:seg | : |
Description
AT1G74970 (E=2e-086) RPS9, TWN3 | RPS9 (RIBOSOMAL PROTEIN S9); structural constituent of ribosome
Coordinates
chrA07:-:20387082..20387791
Molecular Weight (calculated)
22809.8 Da
IEP (calculated)
10.976
GRAVY (calculated)
-0.178
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSVSNLAS SLSSLSFSSQ VSHGPNALSF PRANYLFSLP AKSPRRASLS ITATVAAPAE VAEDDTMELK KYVKSRLPGG FAAQKIIGTG RRKCAIARVV
101: LQEGTGKVII NYRDAKEYLQ GNPLWLQYVK VPLVTLGYEN SYDVFVKAHG GGLSGQAQAI TLGVARALLK VSADHRSPLK KEGLLTRDAR VVERKKVGLK
201: KARKAPQFSK R
101: LQEGTGKVII NYRDAKEYLQ GNPLWLQYVK VPLVTLGYEN SYDVFVKAHG GGLSGQAQAI TLGVARALLK VSADHRSPLK KEGLLTRDAR VVERKKVGLK
201: KARKAPQFSK R
001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR
Arabidopsis Description
RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.