Factsheet for TraesCS5B01G409400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G414600.1	Wheat	plastid	98.23	98.67
TraesCS5A01G404500.1	Wheat	plastid	96.46	96.89
EER90823	Sorghum	plastid	77.43	78.12
Bra003776.1-P	Field mustard	cytosol	49.56	77.24
Os03t0769100-01	Rice	plastid	72.12	73.09
Zm00001d034192_P001	Maize	plastid	69.91	70.54
HORVU5Hr1G098340.3	Barley	plastid	82.74	70.3
Bra015878.1-P	Field mustard	plastid	59.29	63.51
CDX68153	Canola	plastid	58.85	62.74
CDX73129	Canola	plastid	58.41	62.56
CDX85870	Canola	plastid	57.96	62.09
CDY64476	Canola	plastid	57.52	61.32
AT1G74970.1	Thale cress	plastid	56.19	61.06
VIT_18s0001g11750.t01	Wine grape	plastid	55.75	60.29
KRH05768	Soybean	plastid	54.42	59.42
KRH15268	Soybean	nucleus	54.42	59.42
PGSC0003DMT400043484	Potato	mitochondrion, plastid	54.42	58.57
GSMUA_Achr2P17190_001	Banana	plastid	56.19	57.47
Solyc04g079790.2.1	Tomato	plastid	54.87	52.32
TraesCS2B01G154400.1	Wheat	mitochondrion	26.99	13.74

Protein Annotations

MapMan:17.7.2.2.9	Gene3D:3.30.230.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR014721	HAMAP:MF_00532_B
PFAM:PF00380	ScanProsite:PS00360	PANTHER:PTHR21569	PANTHER:PTHR21569:SF11	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr
InterPro:Ribosomal_S9	InterPro:Ribosomal_S9_CS	InterPro:Ribosomal_S9_bac/plastid	SUPFAM:SSF54211	EnsemblPlantsGene:TraesCS5B01G409400	EnsemblPlants:TraesCS5B01G409400.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:584824842..584826593

Molecular Weight (calculated)

24483.8 Da

IEP (calculated)

10.776

GRAVY (calculated)

-0.141

Length

226 amino acids

Sequence
(BLAST)

001: MALSVSSLAS AFSHLSLPST SAPHPLPLLR LHPTTRRAAR LVLFASGADA AEPVLEAEAP AADDGPEEVL AVEAEEDALS GLALRKYVKQ RLPGGFAAQR
101: ITATGRRKMA SARVVLQEGT GKVFINFRDA KEYLQANPMW VEYCKIPLVT LGFENNYDVF VKVQGGGLSG QAQAICLGVA RALLKISPAN RVPLRSEGLL
201: TRDTRVVERK KAGLRKARKR PQFSKR

Best Arabidopsis Sequence Match ( AT1G74970.1 )
(BLAST)

001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR

Arabidopsis Description

RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.