CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003776.1-P	Field mustard	cytosol	68.4	100.0
CDY64476	Canola	plastid	93.4	93.4
CDX73129	Canola	plastid	87.74	88.15
CDX85870	Canola	plastid	86.79	87.2
AT1G74970.1	Thale cress	plastid	81.6	83.17
VIT_18s0001g11750.t01	Wine grape	plastid	75.0	76.08
KRH15268	Soybean	nucleus	71.7	73.43
KRH05768	Soybean	plastid	70.75	72.46
PGSC0003DMT400043484	Potato	mitochondrion, plastid	67.92	68.57
GSMUA_Achr2P17190_001	Banana	plastid	69.34	66.52
Solyc04g079790.2.1	Tomato	plastid	68.4	61.18
CDX85869	Canola	cytosol, endoplasmic reticulum, plastid	19.34	59.42
EER90823	Sorghum	plastid	62.74	59.38
TraesCS5D01G414600.1	Wheat	plastid	62.74	59.11
TraesCS5A01G404500.1	Wheat	plastid	62.74	59.11
TraesCS5B01G409400.1	Wheat	plastid	62.74	58.85
Zm00001d034192_P001	Maize	plastid	60.38	57.14
Os03t0769100-01	Rice	plastid	59.43	56.5
HORVU5Hr1G098340.3	Barley	plastid	58.49	46.62
CDY05901	Canola	mitochondrion, plastid	30.19	16.71
CDY08108	Canola	mitochondrion	30.19	16.62

Protein Annotations

MapMan:17.7.2.2.9	Gene3D:3.30.230.10	GO:A0A078BZ40	EnsemblPlants:CDX68153	ProteinID:CDX68153	ProteinID:CDX68153.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00099407001	InterPro:IPR014721	HAMAP:MF_00532_B	PFAM:PF00380
ScanProsite:PS00360	PANTHER:PTHR21569	PANTHER:PTHR21569:SF11	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	InterPro:Ribosomal_S9
InterPro:Ribosomal_S9_CS	InterPro:Ribosomal_S9_bac/plastid	SUPFAM:SSF54211	UniParc:UPI0004EE9298	SEG:seg	:

Description

BnaA07g21930D

Coordinates

chrLK031787:+:4167554..4168843

Molecular Weight (calculated)

22788.7 Da

IEP (calculated)

10.966

GRAVY (calculated)

-0.186

Length

212 amino acids

Sequence
(BLAST)

001: MALSVSNLAS SLSSLSFSSQ VSQGPTTLSF PRANSAFSLP AKSARRASLS VTATVAAPAE VAEEDDTMEL KKYVKSRLPG GFAAQKIIGT GRRKCAIARV
101: VLQEGTGKVI INYRDAKEYL QGNPLWLQYV KVPLVTLGYE NSYDVFVKAH GGGLSGQAQA ITLGVARALL KVSADHRSPL KKEGLLTRDA RVVERKKVGL
201: KKARKAPQFS KR

Best Arabidopsis Sequence Match ( AT1G74970.1 )
(BLAST)

001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR

Arabidopsis Description

RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.