CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015878.1-P	Field mustard	plastid	96.21	96.21
CDX85870	Canola	plastid	95.26	95.26
CDX68153	Canola	plastid	88.15	87.74
CDY64476	Canola	plastid	84.83	84.43
AT1G74970.1	Thale cress	plastid	79.15	80.29
VIT_18s0001g11750.t01	Wine grape	plastid	75.36	76.08
KRH15268	Soybean	nucleus	72.04	73.43
KRH05768	Soybean	plastid	70.62	71.98
PGSC0003DMT400043484	Potato	mitochondrion, plastid	67.77	68.1
GSMUA_Achr2P17190_001	Banana	plastid	68.25	65.16
Solyc04g079790.2.1	Tomato	plastid	67.77	60.34
EER90823	Sorghum	plastid	63.98	60.27
CDX85869	Canola	cytosol, endoplasmic reticulum, plastid	19.43	59.42
TraesCS5A01G404500.1	Wheat	plastid	63.03	59.11
TraesCS5D01G414600.1	Wheat	plastid	62.56	58.67
TraesCS5B01G409400.1	Wheat	plastid	62.56	58.41
Zm00001d034192_P001	Maize	plastid	61.14	57.59
Os03t0769100-01	Rice	plastid	58.29	55.16
HORVU5Hr1G098340.3	Barley	plastid	57.35	45.49
CDY05901	Canola	mitochondrion, plastid	30.81	16.97
CDY08108	Canola	mitochondrion	30.81	16.88

Protein Annotations

MapMan:17.7.2.2.9	Gene3D:3.30.230.10	GO:A0A078CAC2	EnsemblPlants:CDX73129	ProteinID:CDX73129	ProteinID:CDX73129.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00103602001	InterPro:IPR014721	HAMAP:MF_00532_B	PFAM:PF00380
ScanProsite:PS00360	PANTHER:PTHR21569	PANTHER:PTHR21569:SF11	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	InterPro:Ribosomal_S9
InterPro:Ribosomal_S9_CS	InterPro:Ribosomal_S9_bac/plastid	SUPFAM:SSF54211	UniParc:UPI0004EE0726	SEG:seg	:

Description

BnaC06g35770D

Coordinates

chrLK031797:-:2242179..2243288

Molecular Weight (calculated)

22685.6 Da

IEP (calculated)

10.999

GRAVY (calculated)

-0.193

Length

211 amino acids

Sequence
(BLAST)

001: MALSVSSLAS SLSSLSFSSQ VSHGPTTLSF PKSNSAFSLP AKSPRRASLS ITATVAAPAE VSEDDTMELK KYVKSRLPGG FAAQKIIGTG RRKCAIARVV
101: LQEGTGKVII NYRDAKEYLQ GNPLWLQYVK VPLVTLGYEN SYDVFVKAHG GGLSGQAQAI TLGVARALLK VSADHRSPLK KEGLLTRDAR VVERKKVGLK
201: KARKAPQFSK R

Best Arabidopsis Sequence Match ( AT1G74970.1 )
(BLAST)

001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR

Arabidopsis Description

RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.