CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003776.1-P	Field mustard	cytosol	68.4	100.0
CDX68153	Canola	plastid	93.4	93.4
CDX73129	Canola	plastid	84.43	84.83
CDX85870	Canola	plastid	83.49	83.89
AT1G74970.1	Thale cress	plastid	78.77	80.29
VIT_18s0001g11750.t01	Wine grape	plastid	74.53	75.6
KRH15268	Soybean	nucleus	69.34	71.01
KRH05768	Soybean	plastid	68.87	70.53
PGSC0003DMT400043484	Potato	mitochondrion, plastid	66.51	67.14
GSMUA_Achr2P17190_001	Banana	plastid	68.4	65.61
Solyc04g079790.2.1	Tomato	plastid	66.98	59.92
CDX85869	Canola	cytosol, endoplasmic reticulum, plastid	19.34	59.42
EER90823	Sorghum	plastid	61.79	58.48
TraesCS5A01G404500.1	Wheat	plastid	61.79	58.22
TraesCS5D01G414600.1	Wheat	plastid	61.32	57.78
TraesCS5B01G409400.1	Wheat	plastid	61.32	57.52
Zm00001d034192_P001	Maize	plastid	60.38	57.14
Os03t0769100-01	Rice	plastid	59.43	56.5
HORVU5Hr1G098340.3	Barley	plastid	58.49	46.62
CDY05901	Canola	mitochondrion, plastid	30.66	16.97
CDY08108	Canola	mitochondrion	30.66	16.88

Protein Annotations

MapMan:17.7.2.2.9	Gene3D:3.30.230.10	GO:A0A078JCZ3	UniProt:A0A078JCZ3	EnsemblPlants:CDY64476	ProteinID:CDY64476
ProteinID:CDY64476.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	EnsemblPlantsGene:GSBRNA2T00041261001	InterPro:IPR014721
HAMAP:MF_00532_B	PFAM:PF00380	ScanProsite:PS00360	PANTHER:PTHR21569	PANTHER:PTHR21569:SF11	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Ribosomal_S5_D2-typ_fold_subgr	InterPro:Ribosomal_S9	InterPro:Ribosomal_S9_CS	InterPro:Ribosomal_S9_bac/plastid	SUPFAM:SSF54211	UniParc:UPI0004EE7F70
SEG:seg	:	:	:	:	:

Description

BnaAnng19390DBnaAnng19390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCZ3]

Coordinates

chrLK034471:+:27339..28412

Molecular Weight (calculated)

22953.9 Da

IEP (calculated)

10.901

GRAVY (calculated)

-0.212

Length

212 amino acids

Sequence
(BLAST)

001: MALSVSNLAS SLSSLSFSSQ VSHGPTTLSL PRSNYLFSLP AKSPRRASLS ITATVAAPAE VSEEDDTMEL KKYVKSRLPG GFAAQKIIGT GRRKCAIARV
101: VLQEGTGKVI INYRDAKEYL QGNPLWLQYV KVPLVTLGYE NSYDVFVKAH GGGLSGQAQA ITLGVARALL KVSADHRSPL KKEGLLTRDA RVVERKKVGL
201: KKARKAPQFS KR

Best Arabidopsis Sequence Match ( AT1G74970.1 )
(BLAST)

001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR

Arabidopsis Description

RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.