Factsheet for HORVU5Hr1G098340.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G404500.1	Wheat	plastid	72.18	85.33
TraesCS5B01G409400.1	Wheat	plastid	70.3	82.74
TraesCS5D01G414600.1	Wheat	plastid	69.92	82.67
Bra003776.1-P	Field mustard	cytosol	41.73	76.55
EER90823	Sorghum	plastid	60.15	71.43
Os03t0769100-01	Rice	plastid	56.02	66.82
Zm00001d034192_P001	Maize	plastid	54.51	64.73
AT1G74970.1	Thale cress	plastid	46.62	59.62
Bra015878.1-P	Field mustard	plastid	46.99	59.24
CDY64476	Canola	plastid	46.62	58.49
CDX68153	Canola	plastid	46.62	58.49
KRH05768	Soybean	plastid	45.11	57.97
VIT_18s0001g11750.t01	Wine grape	plastid	45.49	57.89
CDX85870	Canola	plastid	45.86	57.82
CDX73129	Canola	plastid	45.49	57.35
KRH15268	Soybean	nucleus	44.36	57.0
PGSC0003DMT400043484	Potato	mitochondrion, plastid	43.98	55.71
GSMUA_Achr2P17190_001	Banana	plastid	45.49	54.75
Solyc04g079790.2.1	Tomato	plastid	43.98	49.37
HORVU2Hr1G023120.1	Barley	mitochondrion	23.31	13.75

Protein Annotations

Gene3D:3.30.230.10	MapMan:35.1	UniProt:A0A287SG92	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G098340
EnsemblPlants:HORVU5Hr1G098340.3	InterPro:IPR014721	HAMAP:MF_00532_B	PFAM:PF00380	ScanProsite:PS00360	PANTHER:PTHR21569
PANTHER:PTHR21569:SF11	InterPro:Ribosomal_S5_D2-typ_fold	InterPro:Ribosomal_S5_D2-typ_fold_subgr	InterPro:Ribosomal_S9	InterPro:Ribosomal_S9_CS	InterPro:Ribosomal_S9_bac/plastid
SUPFAM:SSF54211	UniParc:UPI000B47EDC6	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:607080100..607082067

Molecular Weight (calculated)

29062.5 Da

IEP (calculated)

11.597

GRAVY (calculated)

-0.309

Length

266 amino acids

Sequence
(BLAST)

001: MNSNRRPSHS KLAERKLIPL RPRPIHPART PIRHRSRRTM ALSVSSLASA FSHLSLPSTS AAQPPPLLRL LPSTRRAARL VLLASGADAA EPVEPEAPAA
101: DDGPEEVLAV EAEEDALSGL ALRKYVKQRL PGGFAAQRIT ATGRRKMASA RVVLQEGTGK VFINFREAKV VEYLQGNPMW VEYCKIPLAT LGFENNYDVF
201: VKVQGGGLSG QAQAICLGVA RALLKISPAN RVALRSEGLL TRDTRVVERK KAGLKKARKR PQFSKR

Best Arabidopsis Sequence Match ( AT1G74970.1 )
(BLAST)

001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR

Arabidopsis Description

RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.