Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015878.1-P | Field mustard | plastid | 100.0 | 68.72 |
| CDX68153 | Canola | plastid | 100.0 | 68.4 |
| CDY64476 | Canola | plastid | 100.0 | 68.4 |
| AT1G74970.1 | Thale cress | plastid | 97.93 | 68.27 |
| VIT_18s0001g11750.t01 | Wine grape | plastid | 93.1 | 64.59 |
| KRH15268 | Soybean | nucleus | 87.59 | 61.35 |
| KRH05768 | Soybean | plastid | 86.9 | 60.87 |
| PGSC0003DMT400043484 | Potato | mitochondrion, plastid | 82.76 | 57.14 |
| GSMUA_Achr2P17190_001 | Banana | plastid | 86.9 | 57.01 |
| EER90823 | Sorghum | plastid | 79.31 | 51.34 |
| Zm00001d034192_P001 | Maize | plastid | 78.62 | 50.89 |
| Os03t0769100-01 | Rice | plastid | 77.93 | 50.67 |
| Solyc04g079790.2.1 | Tomato | plastid | 82.76 | 50.63 |
| TraesCS5A01G404500.1 | Wheat | plastid | 77.24 | 49.78 |
| TraesCS5D01G414600.1 | Wheat | plastid | 77.24 | 49.78 |
| TraesCS5B01G409400.1 | Wheat | plastid | 77.24 | 49.56 |
| HORVU5Hr1G098340.3 | Barley | plastid | 76.55 | 41.73 |
| Bra018009.1-P | Field mustard | mitochondrion | 38.62 | 13.79 |
Protein Annotations
| MapMan:17.7.2.2.9 | Gene3D:3.30.230.10 | EnsemblPlantsGene:Bra003776 | EnsemblPlants:Bra003776.1 | EnsemblPlants:Bra003776.1-P | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0030529 | InterPro:IPR014721 | UniProt:M4CHU3 | HAMAP:MF_00532_B | PFAM:PF00380 |
| ScanProsite:PS00360 | PANTHER:PTHR21569 | PANTHER:PTHR21569:SF11 | InterPro:Ribosomal_S5_D2-typ_fold | InterPro:Ribosomal_S5_D2-typ_fold_subgr | InterPro:Ribosomal_S9 |
| InterPro:Ribosomal_S9_CS | InterPro:Ribosomal_S9_bac/plastid | SUPFAM:SSF54211 | UniParc:UPI0002541641 | : | : |
Description
AT1G74970 (E=3e-077) RPS9, TWN3 | RPS9 (RIBOSOMAL PROTEIN S9); structural constituent of ribosome
Coordinates
chrA07:+:15006063..15006909
Molecular Weight (calculated)
16031.9 Da
IEP (calculated)
11.109
GRAVY (calculated)
-0.324
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MELKKYVKSR LPGGFAAQKI IGTGRRKCAI ARVVLQEGTG KVIINYRDAK EYLQGNPLWL QYVKVPLVTL GYENSYDVFV KAHGGGLSGQ AQAITLGVAR
101: ALLKVSADHR SPLKKEGLLT RDARVVERKK VGLKKARKAP QFSKR
101: ALLKVSADHR SPLKKEGLLT RDARVVERKK VGLKKARKAP QFSKR
001: MASITNLASS LSSLSFSSQV SQRPNTISFP RANSVFALPA KSARRASLSI TATVSAPPEE EEIVELKKYV KSRLPGGFAA QKIIGTGRRK CAIARVVLQE
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR
101: GTGKVIINYR DAKEYLQGNP LWLQYVKVPL VTLGYENSYD IFVKAHGGGL SGQAQAITLG VARALLKVSA DHRSPLKKEG LLTRDARVVE RKKAGLKKAR
201: KAPQFSKR
Arabidopsis Description
RPS930S ribosomal protein S9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XJ27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.