Factsheet for Bra030548.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019999.1-P
Bra030793.1-P
Bra032176.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03900.1	Bra019999.1-P	AT1G09700.1	21798944
AT1G03900.1	Bra030793.1-P	AT1G09700.1	21798944
AT1G03900.1	Bra032176.1-P	AT2G23290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15480	Canola	nucleus	99.27	99.27
AT1G03900.1	Thale cress	nucleus	92.34	93.01
Bra015277.1-P	Field mustard	nucleus	90.88	91.21
PGSC0003DMT400065575	Potato	cytosol	49.27	78.49
VIT_07s0005g03660.t01	Wine grape	cytosol	74.45	73.38
Solyc06g008340.2.1	Tomato	cytosol	70.44	70.44
PGSC0003DMT400065577	Potato	cytosol	70.44	70.44
Solyc09g066490.2.1	Tomato	cytosol	72.63	70.32
KRH19576	Soybean	cytosol	72.63	70.07
PGSC0003DMT400026697	Potato	cytosol	72.63	70.07
KRH32201	Soybean	cytosol	71.53	69.75
Zm00001d014039_P001	Maize	cytosol	71.53	69.01
EER94087	Sorghum	cytosol	71.53	69.01
Os10t0476000-01	Rice	cytosol	71.53	68.29
TraesCS1A01G153300.1	Wheat	cytosol	69.34	67.86
GSMUA_Achr5P03850_001	Banana	nucleus	70.07	67.84
TraesCS1B01G171600.1	Wheat	cytosol	68.98	67.5
TraesCS1D01G151800.1	Wheat	cytosol	68.98	67.5
GSMUA_AchrUn_...	Banana	nucleus	68.25	65.38
Bra014563.1-P	Field mustard	nucleus	28.83	26.78

Protein Annotations

EnsemblPlants:Bra030548.1	EnsemblPlants:Bra030548.1-P	EnsemblPlantsGene:Bra030548	Gene3D:2.30.29.30	GO:GO:0005575	GO:GO:0006810
GO:GO:0006897	GO:GO:0008150	GO:GO:0016020	InterPro:IPR011993	InterPro:NECAP_PHear	InterPro:PH-like_dom_sf
PANTHER:PTHR12847	PANTHER:PTHR12847:SF3	PFAM:PF07933	SEG:seg	SUPFAM:SSF50729	UniParc:UPI00025458B5
UniProt:M4EP28	MapMan:35.1	:	:	:	:

Description

AT1G03900 (E=3e-120) ATNAP4 | ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4); ATPase, coupled to transmembrane movement of substances / transporter

Coordinates

chrA08:-:21373833..21375492

Molecular Weight (calculated)

30181.1 Da

IEP (calculated)

6.073

GRAVY (calculated)

-0.761

Length

274 amino acids

Sequence
(BLAST)

001: MSFEEEEKEE EETFEHTLLV VREVSVYKIP PRTTSGGYKC GEWLQSDKIW SGRLRVVSCK DRCEIRLEDS NSGDLFAACF VDPGRRENSV EPSLDSSRYF
101: VLRIDDGRGK YAFIGLGFAE RNEAFDFNVA LSDHEKYVRR EKEKESGETS ESDDHIDIHP AVNHRLKEGE TIRINVKPKP TTNGTGMLSA ALSGNGKPLA
201: LAPPPTAATK TRSPLPPPPN DPVTSRIASD SSTGNTRRRN DPLSDLSQLK KNLPPTQGSG PTKSTGAASG WAAF

Best Arabidopsis Sequence Match ( AT1G03900.1 )
(BLAST)

001: MSFEEEEEEE TFEHTLLVVR EVSVYKIPPR TTSGGYKCGE WLQSDKIWSG RLRVVSCKDR CEIRLEDSNS GDLFAACFVD PGRRENSVEP SLDSSRYFVL
101: RIDDGRGKYA FIGLGFAERN EAFDFNVALS DHEKYVRREK EKETGETSES DNHIDIHPAV NHRLKEGETI RINVKPKPTT NGTGMLSAAL SGTGKPKPLA
201: LAPPPKAAGV TRSPLPPPPN DPVASRIASD GCKESRRNEP LSDLSQLKKN LPSTAGSGSS KSTGAASGWA AF

Arabidopsis Description

ATNAP4NAP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WMR3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.