Factsheet for Bra031272.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51452	Canola	plastid	96.77	91.67
Bra008455.1-P	Field mustard	cytosol	20.47	91.2
Bra019367.1-P	Field mustard	cytosol	20.47	91.2
AT3G21300.1	Thale cress	mitochondrion	86.89	87.36
Bra009808.1-P	Field mustard	cytosol	17.24	77.42
KRH23347	Soybean	nucleus	70.74	73.92
Solyc03g121260.2.1	Tomato	plastid	68.4	66.96
KRH09984	Soybean	mitochondrion	43.45	64.88
GSMUA_Achr2P19450_001	Banana	cytosol, mitochondrion	70.02	64.78
VIT_09s0002g02670.t01	Wine grape	plastid	66.25	64.74
Os01t0193600-01	Rice	mitochondrion, plastid	63.38	63.38
EES00136	Sorghum	mitochondrion	63.38	63.26
TraesCS3A01G105900.1	Wheat	mitochondrion	62.84	62.61
TraesCS3D01G108100.1	Wheat	mitochondrion	62.66	62.54
TraesCS3B01G124400.1	Wheat	mitochondrion	62.48	62.37
Zm00001d039477_P001	Maize	plastid	61.58	61.47
HORVU3Hr1G019340.3	Barley	plastid	62.48	59.08
PGSC0003DMT400006437	Potato	plastid	67.33	58.69
Bra011947.1-P	Field mustard	nucleus	24.06	17.07

Protein Annotations

Gene3D:2.40.50.140	InterPro:23S_rRNA_MeTrfase_RlmD	Gene3D:3.40.1350.30	Gene3D:3.40.50.150	MapMan:50.2.1	EnsemblPlantsGene:Bra031272
EnsemblPlants:Bra031272.1	EnsemblPlants:Bra031272.1-P	GO:GO:0001510	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008173	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR002792
InterPro:IPR010280	UniProt:M4ER49	InterPro:MeTrfase_TrmA_CS	InterPro:NA-bd_OB-fold	PFAM:PF05958	ScanProsite:PS01231
PFscan:PS50926	PFscan:PS51687	PANTHER:PTHR11061	PANTHER:PTHR11061:SF30	InterPro:SAM-dependent_MTases	SUPFAM:SSF50249
SUPFAM:SSF53335	TIGRFAMs:TIGR00479	InterPro:TRAM_dom	InterPro:U5_MeTrfase_fam	UniParc:UPI0002547823	SEG:seg

Description

AT3G21300 (E=1e-280) | RNA methyltransferase family protein

Coordinates

chrA05:+:16443858..16446397

Molecular Weight (calculated)

61868.4 Da

IEP (calculated)

7.612

GRAVY (calculated)

-0.249

Length

557 amino acids

Sequence
(BLAST)

001: MLATTPAHAL RLRYVVPTRA WLHKFRCSSS SSAVPLAHLS ASQLSGGNNN TLKANKEENN SEKKTAPYYP KRGQTVELVC ESLGFKGKGI CKVDGTGFVV
101: MCDRALPGER FLGRVTRRKG SYAEVTKIKT LTPHRDLVEA PCEYASYCGG CKAQNLSYEA QLRAKEEQVH ELITHVGRFS DNNPGLETVL KPIVPCDIQF
201: NYRNKMEFSF GPQRWLPVEM LHEREDGPVS FALGLHAPGF FDKVLNVDKC LLQSEPANMV LAAVQDCWRD PELNLSPYNA RSHAGFLKHL MLRTGRNVET
301: GSQELMINFV TSSYKPELLK PLVDKVSSIP EVVSIMNNVN SSVGNTSVGE QEYTLYGKET IAEVLRGLTF QISANSFFQT NTHQAEVLYK LIEECAGLKG
401: DGSEVVLDLF CGTGTIGLTL ARRAKHVYGY EVVQQAITDA HKNAQINGIE NATFIQGDLN KIGEDFGSNF PKPDIVISDP NRPGMHMKLI KFLLNLKSPR
501: IIYVSCNPAT CARDLDYLCH GVEEKNIKGC YKLMSVQPVD MFPHTPHIEC VCLLELS

Best Arabidopsis Sequence Match ( AT3G21300.1 )
(BLAST)

001: MLAATPAHGL RYVVVPTRSW LHRFRCCSSS LAPLSPSEFS GGNKAQKKLN DENNTNVSNE KTAPYYPKRG ETVELVCESL GFKGKGICKV DGTGYVVMCD
101: RALPGERFLG RVTRRKGSYA EVTKMKTISP HKDLVEAPCE YASYCGGCKT QNLSYEAQLR AKEEQVHELI RHVGRFSDNN PGLEIVLKPI VACDIQFHYR
201: NKMEFSFGPQ RWLPIEMLNE RQDGPKNFAL GLHAPGFFDK VLNVDKCLLQ SEPGNLVLAA VQDCWRDPEL SLSPYDCRSH VGFLKHLMLR TGRNVETGSL
301: ELMVNFVTSS YKPELLKPLV DRISSIPQVV SIMNNVNSSV GNTSVGEKEY TLYGKDTITE VLRGLTFQIS ANSFFQTNTH QAEVLYKLIE ESAGLKGDGS
401: EVVLDLFCGT GTIGLTLARR AKHVYGYEVV PQAITDAHKN AQINGIENAT FIQGDLNKIG EDFGNNFPKP DIVISDPNRP GMHMKLIKFL LKLKSPRIIY
501: VSCNPATCAR DLDYLCHGVE EKNLKGCYKL MSVQPVDMFP HTPHIECVCL LELA

Arabidopsis Description

RNA methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU28]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.