Factsheet for Os01t0193600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 4
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G124400.1	Wheat	mitochondrion	84.74	84.59
TraesCS3D01G108100.1	Wheat	mitochondrion	84.56	84.41
TraesCS3A01G105900.1	Wheat	mitochondrion	84.02	83.72
EES00136	Sorghum	mitochondrion	83.48	83.33
Zm00001d039477_P001	Maize	plastid	82.05	81.9
HORVU3Hr1G019340.3	Barley	plastid	84.38	79.8
KRH23347	Soybean	nucleus	63.02	65.85
AT3G21300.1	Thale cress	mitochondrion	63.55	63.9
Bra031272.1-P	Field mustard	mitochondrion	63.38	63.38
CDY56917	Canola	plastid	64.27	61.41
GSMUA_Achr2P19450_001	Banana	cytosol, mitochondrion	65.71	60.8
CDY51452	Canola	plastid	63.73	60.37
Solyc03g121260.2.1	Tomato	plastid	60.5	59.23
KRH09984	Soybean	mitochondrion	38.78	57.91
VIT_09s0002g02670.t01	Wine grape	plastid	58.53	57.19
CDY37612	Canola	cytosol	12.03	53.6
Bra019367.1-P	Field mustard	cytosol	12.03	53.6
Bra008455.1-P	Field mustard	cytosol	12.03	53.6
PGSC0003DMT400006437	Potato	plastid	60.32	52.58
CDX88149	Canola	cytosol	10.95	49.19
Bra009808.1-P	Field mustard	cytosol	10.95	49.19
Os04t0105000-01	Rice	nucleus	10.95	12.53

Protein Annotations

Gene3D:2.40.50.140	InterPro:23S_rRNA_MeTrfase_RlmD	Gene3D:3.40.1350.30	Gene3D:3.40.50.150	EntrezGene:4327311	MapMan:50.2.1
EMBL:AK068784	ProteinID:BAB12711.1	ProteinID:BAB16852.1	ProteinID:BAF04196.1	ProteinID:BAS70845.1	GO:GO:0001510
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139
GO:GO:0006396	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008173
GO:GO:0009409	GO:GO:0009628	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	GO:GO:0046872
InterPro:IPR002792	InterPro:IPR010280	InterPro:MeTrfase_TrmA_CS	InterPro:NA-bd_OB-fold	EnsemblPlantsGene:Os01g0193600	EnsemblPlants:Os01t0193600-01
PFAM:PF05958	ScanProsite:PS01231	PFscan:PS50926	PFscan:PS51687	PANTHER:PTHR11061	PANTHER:PTHR11061:SF30
UniProt:Q9FEB7	InterPro:SAM-dependent_MTases	SUPFAM:SSF50249	SUPFAM:SSF53335	TIGRFAMs:TIGR00479	InterPro:TRAM_dom
InterPro:U5_MeTrfase_fam	UniParc:UPI00000A9CA9	RefSeq:XP_015625606.1	RefSeq:XP_015625614.1	SEG:seg	:

Description

Methyltransferase small domain containing protein. (Os01t0193600-01)

Coordinates

chr1:-:5021104..5025704

Molecular Weight (calculated)

61714.0 Da

IEP (calculated)

8.001

GRAVY (calculated)

-0.196

Length

557 amino acids

Sequence
(BLAST)

001: MATAAAAAAA AFSPLRRRLP LHHRGRRLLA VAAALSPEPP APTPTTSPPP PPRKGYFPKR NEVLELTCEG LAFKGKGVCR VDGSTFVLLC DGALPGERLL
101: ARVRRIRRGA FAEAAKLRTL EPHRDAVDAP CPLAADCGGC KAQSLAYAAQ IRHKHLQVRE LLVNFGKFDP RKMESSEPDA ILKPIVPCDE IFRYRNKMEF
201: SFGTKRWMQR EWKEEKDDEV VKEEKVEGDG YSLGLHAPGF FDKVLHVEKC LLQSEPADKV LAIVQETWLD PALGLTPYDV HKHVGFLKHL MIRTGRNITT
301: GAPEVMVNFV TSCYKPELLE PLVNNITKIP EVVSIMNNVN TSVGNTSVGE EEYTLYGKPT ITEMLRGLTF QISANSFFQT NTKQADVLYK LIGESAGLKG
401: DGSEIILDLF CGTGTIGLTL ARRAKHVYGY EVVPEAIADA KKNAKLNGIS NATFVQGDLN KINETFGKEF PKPDIIISDP NRPGMHMKLI KWLLEVKAPR
501: IVYVSCNPAT CARDLDYLCH GVEEKDLKGC YELKTVIPVD MFPHTPHIEC ICVLELC

Best Arabidopsis Sequence Match ( AT3G21300.1 )
(BLAST)

001: MLAATPAHGL RYVVVPTRSW LHRFRCCSSS LAPLSPSEFS GGNKAQKKLN DENNTNVSNE KTAPYYPKRG ETVELVCESL GFKGKGICKV DGTGYVVMCD
101: RALPGERFLG RVTRRKGSYA EVTKMKTISP HKDLVEAPCE YASYCGGCKT QNLSYEAQLR AKEEQVHELI RHVGRFSDNN PGLEIVLKPI VACDIQFHYR
201: NKMEFSFGPQ RWLPIEMLNE RQDGPKNFAL GLHAPGFFDK VLNVDKCLLQ SEPGNLVLAA VQDCWRDPEL SLSPYDCRSH VGFLKHLMLR TGRNVETGSL
301: ELMVNFVTSS YKPELLKPLV DRISSIPQVV SIMNNVNSSV GNTSVGEKEY TLYGKDTITE VLRGLTFQIS ANSFFQTNTH QAEVLYKLIE ESAGLKGDGS
401: EVVLDLFCGT GTIGLTLARR AKHVYGYEVV PQAITDAHKN AQINGIENAT FIQGDLNKIG EDFGNNFPKP DIVISDPNRP GMHMKLIKFL LKLKSPRIIY
501: VSCNPATCAR DLDYLCHGVE EKNLKGCYKL MSVQPVDMFP HTPHIECVCL LELA

Arabidopsis Description

RNA methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU28]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.