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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37612 Canola cytosol 19.55 91.2
CDY51452 Canola plastid 91.08 90.31
AT3G21300.1 Thale cress mitochondrion 81.3 85.56
CDX88149 Canola cytosol 16.47 77.42
KRH23347 Soybean nucleus 68.1 74.48
Solyc03g121260.2.1 Tomato plastid 65.35 66.96
VIT_09s0002g02670.t01 Wine grape plastid 64.67 66.14
KRH09984 Soybean mitochondrion 41.68 65.15
GSMUA_Achr2P19450_001 Banana cytosol, mitochondrion 66.72 64.62
Os01t0193600-01 Rice mitochondrion, plastid 61.41 64.27
EES00136 Sorghum mitochondrion 60.72 63.44
TraesCS3A01G105900.1 Wheat mitochondrion 60.38 62.97
TraesCS3D01G108100.1 Wheat mitochondrion 60.21 62.9
TraesCS3B01G124400.1 Wheat mitochondrion 60.03 62.72
Zm00001d039477_P001 Maize plastid 59.18 61.83
HORVU3Hr1G019340.3 Barley plastid 59.69 59.08
PGSC0003DMT400006437 Potato plastid 64.67 59.0
CDY60349 Canola nucleus 18.87 21.83
CDY60348 Canola golgi, vacuole 18.87 20.07
CDY04566 Canola nucleus 24.19 18.65
CDY15748 Canola nucleus 24.19 18.43
Protein Annotations
Gene3D:2.40.50.140InterPro:23S_rRNA_MeTrfase_RlmDGene3D:3.40.1350.30Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078J3C2
UniProt:A0A078J3C2EnsemblPlants:CDY56917ProteinID:CDY56917ProteinID:CDY56917.1GO:GO:0001510GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0005488GO:GO:0006139GO:GO:0006396
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008173GO:GO:0009987GO:GO:0016740
GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00020272001InterPro:IPR002792InterPro:IPR010280InterPro:MeTrfase_TrmA_CSInterPro:NA-bd_OB-fold
PFAM:PF05958ScanProsite:PS01231PFscan:PS50926PFscan:PS51687PANTHER:PTHR11061PANTHER:PTHR11061:SF30
InterPro:SAM-dependent_MTasesSUPFAM:SSF50249SUPFAM:SSF53335TIGRFAMs:TIGR00479InterPro:TRAM_domInterPro:U5_MeTrfase_fam
UniParc:UPI0004EE4A03SEG:seg::::
Description
BnaCnng31380DBnaCnng31380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3C2]
Coordinates
chrLK033531:+:22685..25348
Molecular Weight (calculated)
64664.6 Da
IEP (calculated)
7.328
GRAVY (calculated)
-0.266
Length
583 amino acids
Sequence
(BLAST)
001: MKMTNSPFIT TSEKVAFEHS PTSTPMLATA PAHALRLRYV APSRLWFHKF RCSSSSSSSA VPLANLSDSE LSGGNNTLKA NEDKNNSEKK TAPYYPKRGQ
101: TVELVCESLG FKGKGICKVD GTGFVVMCDR ALPGERFLGR VTRRKGSYAE VTKIKTLTPH RDLVEAPCEY ASYCGGCKAQ NLSYEAQLRA KEEQVHELIT
201: HVGRFSDNNP GLETVLKPIV PCDIQFNYRN KMEFSFGPQR WLPVEMLHER EDGPMSFALG LHAPGFFDKV LNVDKCLLQS EPANMVLAAV QDCWRDPELN
301: LSPYNARSHA GFLKHLMLRT GRNVETGSQE LMVNFVTSSY KPELLKPLVD KVSSIPEVVS IMNNVNSSVG NTSVGEQEYT LYGKETIADV LRGLTFQISA
401: NSFFQTNTHQ AEVLYKLIEE CAGLKGDGSE VVLDLFCGTG TIGLTLARRA KHVYGYEVVP QAITDAHKNA QINGIENATF IQGDLNKIGE DFGSNFPKPD
501: IVISDPNRPG MHMKLIKFLL NLKSPRIIYV SCNPATCARD LDYLCHGVEE KNIKGCYKLM SVQPVDMFPH TPHIECVCLL ELS
Best Arabidopsis Sequence Match ( AT3G21300.1 )
(BLAST)
001: MLAATPAHGL RYVVVPTRSW LHRFRCCSSS LAPLSPSEFS GGNKAQKKLN DENNTNVSNE KTAPYYPKRG ETVELVCESL GFKGKGICKV DGTGYVVMCD
101: RALPGERFLG RVTRRKGSYA EVTKMKTISP HKDLVEAPCE YASYCGGCKT QNLSYEAQLR AKEEQVHELI RHVGRFSDNN PGLEIVLKPI VACDIQFHYR
201: NKMEFSFGPQ RWLPIEMLNE RQDGPKNFAL GLHAPGFFDK VLNVDKCLLQ SEPGNLVLAA VQDCWRDPEL SLSPYDCRSH VGFLKHLMLR TGRNVETGSL
301: ELMVNFVTSS YKPELLKPLV DRISSIPQVV SIMNNVNSSV GNTSVGEKEY TLYGKDTITE VLRGLTFQIS ANSFFQTNTH QAEVLYKLIE ESAGLKGDGS
401: EVVLDLFCGT GTIGLTLARR AKHVYGYEVV PQAITDAHKN AQINGIENAT FIQGDLNKIG EDFGNNFPKP DIVISDPNRP GMHMKLIKFL LKLKSPRIIY
501: VSCNPATCAR DLDYLCHGVE EKNLKGCYKL MSVQPVDMFP HTPHIECVCL LELA
Arabidopsis Description
RNA methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU28]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.