Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- mitochondrion 1
- cytosol 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY37612 | Canola | cytosol | 19.55 | 91.2 |
CDY51452 | Canola | plastid | 91.08 | 90.31 |
AT3G21300.1 | Thale cress | mitochondrion | 81.3 | 85.56 |
CDX88149 | Canola | cytosol | 16.47 | 77.42 |
KRH23347 | Soybean | nucleus | 68.1 | 74.48 |
Solyc03g121260.2.1 | Tomato | plastid | 65.35 | 66.96 |
VIT_09s0002g02670.t01 | Wine grape | plastid | 64.67 | 66.14 |
KRH09984 | Soybean | mitochondrion | 41.68 | 65.15 |
GSMUA_Achr2P19450_001 | Banana | cytosol, mitochondrion | 66.72 | 64.62 |
Os01t0193600-01 | Rice | mitochondrion, plastid | 61.41 | 64.27 |
EES00136 | Sorghum | mitochondrion | 60.72 | 63.44 |
TraesCS3A01G105900.1 | Wheat | mitochondrion | 60.38 | 62.97 |
TraesCS3D01G108100.1 | Wheat | mitochondrion | 60.21 | 62.9 |
TraesCS3B01G124400.1 | Wheat | mitochondrion | 60.03 | 62.72 |
Zm00001d039477_P001 | Maize | plastid | 59.18 | 61.83 |
HORVU3Hr1G019340.3 | Barley | plastid | 59.69 | 59.08 |
PGSC0003DMT400006437 | Potato | plastid | 64.67 | 59.0 |
CDY60349 | Canola | nucleus | 18.87 | 21.83 |
CDY60348 | Canola | golgi, vacuole | 18.87 | 20.07 |
CDY04566 | Canola | nucleus | 24.19 | 18.65 |
CDY15748 | Canola | nucleus | 24.19 | 18.43 |
Protein Annotations
Gene3D:2.40.50.140 | InterPro:23S_rRNA_MeTrfase_RlmD | Gene3D:3.40.1350.30 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:A0A078J3C2 |
UniProt:A0A078J3C2 | EnsemblPlants:CDY56917 | ProteinID:CDY56917 | ProteinID:CDY56917.1 | GO:GO:0001510 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006396 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008173 | GO:GO:0009987 | GO:GO:0016740 |
GO:GO:0032259 | EnsemblPlantsGene:GSBRNA2T00020272001 | InterPro:IPR002792 | InterPro:IPR010280 | InterPro:MeTrfase_TrmA_CS | InterPro:NA-bd_OB-fold |
PFAM:PF05958 | ScanProsite:PS01231 | PFscan:PS50926 | PFscan:PS51687 | PANTHER:PTHR11061 | PANTHER:PTHR11061:SF30 |
InterPro:SAM-dependent_MTases | SUPFAM:SSF50249 | SUPFAM:SSF53335 | TIGRFAMs:TIGR00479 | InterPro:TRAM_dom | InterPro:U5_MeTrfase_fam |
UniParc:UPI0004EE4A03 | SEG:seg | : | : | : | : |
Description
BnaCnng31380DBnaCnng31380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3C2]
Coordinates
chrLK033531:+:22685..25348
Molecular Weight (calculated)
64664.6 Da
IEP (calculated)
7.328
GRAVY (calculated)
-0.266
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMTNSPFIT TSEKVAFEHS PTSTPMLATA PAHALRLRYV APSRLWFHKF RCSSSSSSSA VPLANLSDSE LSGGNNTLKA NEDKNNSEKK TAPYYPKRGQ
101: TVELVCESLG FKGKGICKVD GTGFVVMCDR ALPGERFLGR VTRRKGSYAE VTKIKTLTPH RDLVEAPCEY ASYCGGCKAQ NLSYEAQLRA KEEQVHELIT
201: HVGRFSDNNP GLETVLKPIV PCDIQFNYRN KMEFSFGPQR WLPVEMLHER EDGPMSFALG LHAPGFFDKV LNVDKCLLQS EPANMVLAAV QDCWRDPELN
301: LSPYNARSHA GFLKHLMLRT GRNVETGSQE LMVNFVTSSY KPELLKPLVD KVSSIPEVVS IMNNVNSSVG NTSVGEQEYT LYGKETIADV LRGLTFQISA
401: NSFFQTNTHQ AEVLYKLIEE CAGLKGDGSE VVLDLFCGTG TIGLTLARRA KHVYGYEVVP QAITDAHKNA QINGIENATF IQGDLNKIGE DFGSNFPKPD
501: IVISDPNRPG MHMKLIKFLL NLKSPRIIYV SCNPATCARD LDYLCHGVEE KNIKGCYKLM SVQPVDMFPH TPHIECVCLL ELS
101: TVELVCESLG FKGKGICKVD GTGFVVMCDR ALPGERFLGR VTRRKGSYAE VTKIKTLTPH RDLVEAPCEY ASYCGGCKAQ NLSYEAQLRA KEEQVHELIT
201: HVGRFSDNNP GLETVLKPIV PCDIQFNYRN KMEFSFGPQR WLPVEMLHER EDGPMSFALG LHAPGFFDKV LNVDKCLLQS EPANMVLAAV QDCWRDPELN
301: LSPYNARSHA GFLKHLMLRT GRNVETGSQE LMVNFVTSSY KPELLKPLVD KVSSIPEVVS IMNNVNSSVG NTSVGEQEYT LYGKETIADV LRGLTFQISA
401: NSFFQTNTHQ AEVLYKLIEE CAGLKGDGSE VVLDLFCGTG TIGLTLARRA KHVYGYEVVP QAITDAHKNA QINGIENATF IQGDLNKIGE DFGSNFPKPD
501: IVISDPNRPG MHMKLIKFLL NLKSPRIIYV SCNPATCARD LDYLCHGVEE KNIKGCYKLM SVQPVDMFPH TPHIECVCLL ELS
001: MLAATPAHGL RYVVVPTRSW LHRFRCCSSS LAPLSPSEFS GGNKAQKKLN DENNTNVSNE KTAPYYPKRG ETVELVCESL GFKGKGICKV DGTGYVVMCD
101: RALPGERFLG RVTRRKGSYA EVTKMKTISP HKDLVEAPCE YASYCGGCKT QNLSYEAQLR AKEEQVHELI RHVGRFSDNN PGLEIVLKPI VACDIQFHYR
201: NKMEFSFGPQ RWLPIEMLNE RQDGPKNFAL GLHAPGFFDK VLNVDKCLLQ SEPGNLVLAA VQDCWRDPEL SLSPYDCRSH VGFLKHLMLR TGRNVETGSL
301: ELMVNFVTSS YKPELLKPLV DRISSIPQVV SIMNNVNSSV GNTSVGEKEY TLYGKDTITE VLRGLTFQIS ANSFFQTNTH QAEVLYKLIE ESAGLKGDGS
401: EVVLDLFCGT GTIGLTLARR AKHVYGYEVV PQAITDAHKN AQINGIENAT FIQGDLNKIG EDFGNNFPKP DIVISDPNRP GMHMKLIKFL LKLKSPRIIY
501: VSCNPATCAR DLDYLCHGVE EKNLKGCYKL MSVQPVDMFP HTPHIECVCL LELA
101: RALPGERFLG RVTRRKGSYA EVTKMKTISP HKDLVEAPCE YASYCGGCKT QNLSYEAQLR AKEEQVHELI RHVGRFSDNN PGLEIVLKPI VACDIQFHYR
201: NKMEFSFGPQ RWLPIEMLNE RQDGPKNFAL GLHAPGFFDK VLNVDKCLLQ SEPGNLVLAA VQDCWRDPEL SLSPYDCRSH VGFLKHLMLR TGRNVETGSL
301: ELMVNFVTSS YKPELLKPLV DRISSIPQVV SIMNNVNSSV GNTSVGEKEY TLYGKDTITE VLRGLTFQIS ANSFFQTNTH QAEVLYKLIE ESAGLKGDGS
401: EVVLDLFCGT GTIGLTLARR AKHVYGYEVV PQAITDAHKN AQINGIENAT FIQGDLNKIG EDFGNNFPKP DIVISDPNRP GMHMKLIKFL LKLKSPRIIY
501: VSCNPATCAR DLDYLCHGVE EKNLKGCYKL MSVQPVDMFP HTPHIECVCL LELA
Arabidopsis Description
RNA methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU28]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.