CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23347	Soybean	nucleus	83.11	58.16
Bra031272.1-P	Field mustard	mitochondrion	64.88	43.45
AT3G21300.1	Thale cress	mitochondrion	64.08	43.14
CDY56917	Canola	plastid	65.15	41.68
VIT_09s0002g02670.t01	Wine grape	plastid	63.27	41.4
CDY51452	Canola	plastid	65.15	41.33
Solyc03g121260.2.1	Tomato	plastid	61.39	40.25
EES00136	Sorghum	mitochondrion	58.45	39.07
GSMUA_Achr2P19450_001	Banana	cytosol, mitochondrion	62.73	38.87
Os01t0193600-01	Rice	mitochondrion, plastid	57.91	38.78
TraesCS3D01G108100.1	Wheat	mitochondrion	57.91	38.71
Zm00001d039477_P001	Maize	plastid	57.64	38.53
TraesCS3B01G124400.1	Wheat	mitochondrion	57.64	38.53
TraesCS3A01G105900.1	Wheat	mitochondrion	57.37	38.28
HORVU3Hr1G019340.3	Barley	plastid	58.18	36.84
PGSC0003DMT400006437	Potato	plastid	61.13	35.68
CDY37612	Canola	cytosol	9.92	29.6
Bra019367.1-P	Field mustard	cytosol	9.92	29.6
Bra008455.1-P	Field mustard	cytosol	9.92	29.6
CDX88149	Canola	cytosol	7.51	22.58
Bra009808.1-P	Field mustard	cytosol	7.24	21.77
KRH54851	Soybean	cytosol	6.7	19.53
KRH24877	Soybean	nucleus	26.81	11.26
KRH29928	Soybean	nucleus	26.81	11.24

Protein Annotations

Gene3D:3.40.1350.30	Gene3D:3.40.50.150	MapMan:50.2.1	UniProt:A0A0R0FUP5	EMBL:ACUP02009115	EnsemblPlantsGene:GLYMA_15G022200
GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008173	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259
InterPro:IPR010280	EnsemblPlants:KRH09984	ProteinID:KRH09984	ProteinID:KRH09984.1	PFAM:PF05958	PFscan:PS51687
PANTHER:PTHR11061	PANTHER:PTHR11061:SF30	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:U5_MeTrfase_fam	UniParc:UPI0006ED8C31
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:1747259..1749554

Molecular Weight (calculated)

42153.3 Da

IEP (calculated)

7.287

GRAVY (calculated)

-0.310

Length

373 amino acids

Sequence
(BLAST)

001: GRVKPRNDEH FNILLPLHIR RFRSCLSTLS CSLGEDVDPT PNSYFPKRGL TLELVTNSPY CGGCKTQNLS YEAQLRAKEE QVRDLLIHVG RFSREQLQLH
101: GVIKPIVPFD IQFHYRNEME FSFGPRRWLP KELLQDRRAD DDVGNNENYA LGLHAPGFFD KILNVDNCLL QSHPANKVLA AVQECWRDPQ LGFSPYSVHS
201: HKGFLKHLML RTGRDVTTYQ PEVMVNFVTS SYKPELLKFL VDKVSVFPEV VSVVNNVNTS VGEEEYTLYG KSSITETLRG CTFQISANSF FQTNTYQAEV
301: LYKLIEDCAG VRGDGSEIVL DLFCGTGTIG LTLARSDRHV YGYEVVPQAI TDAHLNAKIN GIKKCNICPG RSQ

Best Arabidopsis Sequence Match ( AT3G21300.1 )
(BLAST)

001: MLAATPAHGL RYVVVPTRSW LHRFRCCSSS LAPLSPSEFS GGNKAQKKLN DENNTNVSNE KTAPYYPKRG ETVELVCESL GFKGKGICKV DGTGYVVMCD
101: RALPGERFLG RVTRRKGSYA EVTKMKTISP HKDLVEAPCE YASYCGGCKT QNLSYEAQLR AKEEQVHELI RHVGRFSDNN PGLEIVLKPI VACDIQFHYR
201: NKMEFSFGPQ RWLPIEMLNE RQDGPKNFAL GLHAPGFFDK VLNVDKCLLQ SEPGNLVLAA VQDCWRDPEL SLSPYDCRSH VGFLKHLMLR TGRNVETGSL
301: ELMVNFVTSS YKPELLKPLV DRISSIPQVV SIMNNVNSSV GNTSVGEKEY TLYGKDTITE VLRGLTFQIS ANSFFQTNTH QAEVLYKLIE ESAGLKGDGS
401: EVVLDLFCGT GTIGLTLARR AKHVYGYEVV PQAITDAHKN AQINGIENAT FIQGDLNKIG EDFGNNFPKP DIVISDPNRP GMHMKLIKFL LKLKSPRIIY
501: VSCNPATCAR DLDYLCHGVE EKNLKGCYKL MSVQPVDMFP HTPHIECVCL LELA

Arabidopsis Description

RNA methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU28]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.