Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82409 | Canola | cytosol, peroxisome, plasma membrane | 65.2 | 75.14 |
| AT3G16300.1 | Thale cress | cytosol, peroxisome, plasma membrane | 75.98 | 73.11 |
| CDY30156 | Canola | cytosol, peroxisome, plasma membrane | 82.35 | 68.29 |
| VIT_09s0002g03780.t01 | Wine grape | peroxisome, plastid, vacuole | 42.16 | 40.95 |
| TraesCS3A01G284900.1 | Wheat | plastid | 37.75 | 37.2 |
| KRH47229 | Soybean | cytosol, peroxisome, plasma membrane | 37.75 | 37.02 |
| TraesCS3B01G318800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 37.25 | 36.72 |
| TraesCS3D01G284700.1 | Wheat | plastid | 36.76 | 36.23 |
| KXG33291 | Sorghum | mitochondrion, plasma membrane, plastid, vacuole | 36.76 | 35.55 |
| Os01t0725400-01 | Rice | golgi, plasma membrane, vacuole | 35.29 | 35.29 |
| CDX67924 | Canola | nucleus | 34.8 | 34.47 |
| PGSC0003DMT400006497 | Potato | plasma membrane | 33.33 | 33.83 |
| GSMUA_Achr4P08280_001 | Banana | peroxisome, plasma membrane, plastid | 36.76 | 33.63 |
| Solyc03g120870.2.1 | Tomato | extracellular, peroxisome, plasma membrane, plastid | 33.82 | 33.17 |
| TraesCS3B01G317700.2 | Wheat | plastid | 24.51 | 23.04 |
| CDX79414 | Canola | mitochondrion | 34.8 | 19.56 |
Protein Annotations
| EnsemblPlants:CDX75874 | EnsemblPlantsGene:GSBRNA2T00123860001 | GO:A0A078CIH4 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 |
| PANTHER:PTHR11615:SF118 | PFAM:PF04535 | ProteinID:CDX75874 | ProteinID:CDX75874.1 | SEG:seg | TIGRFAMs:TIGR01569 |
| TMHMM:TMhelix | UniParc:UPI0004EE2455 | MapMan:35.1 | : | : | : |
Description
BnaC03g39570D
Coordinates
chrLK031805:-:1399023..1399710
Molecular Weight (calculated)
22210.3 Da
IEP (calculated)
7.371
GRAVY (calculated)
0.514
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKATEQKKN SITVEETKLD IRDVVTITYD EDNRHGGTRN DVAMVVLRAM CMAVSAVSLL LMVTARETTM TTLYGFEFQL HAVWSLSDSL IYLVVVTSAT
101: VIYSSVQLVL SGTRLMRKTP VVPTRTQAWF CFIADQILGC AMVSGGSAAL GVTNMNRTGI RHMPIPNFCK SLGFFCDHLA ISVVFALLAF LLLAASSILD
201: AGDC
101: VIYSSVQLVL SGTRLMRKTP VVPTRTQAWF CFIADQILGC AMVSGGSAAL GVTNMNRTGI RHMPIPNFCK SLGFFCDHLA ISVVFALLAF LLLAASSILD
201: AGDC
001: MAKAAEQKQN PTVASAEAKL DIRDVVNTAI TYGEDNRHGG GKRNDVAMFV LRAMCMAVST VAVTLMVTAR ETSMTTLYGF EFQLHAVWSL SDSLIYLVVV
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR
Arabidopsis Description
CASP-like protein 3A1 [Source:UniProtKB/Swiss-Prot;Acc:Q3EB59]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.