Factsheet for Os01t0725400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33291	Sorghum	mitochondrion, plasma membrane, plastid, vacuole	79.41	76.78
TraesCS3D01G284700.1	Wheat	plastid	75.49	74.4
TraesCS3B01G318800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	75.49	74.4
TraesCS3A01G284900.1	Wheat	plastid	75.0	73.91
VIT_09s0002g03780.t01	Wine grape	peroxisome, plastid, vacuole	50.49	49.05
GSMUA_Achr4P08280_001	Banana	peroxisome, plasma membrane, plastid	51.47	47.09
KRH47229	Soybean	cytosol, peroxisome, plasma membrane	46.08	45.19
TraesCS3B01G317700.2	Wheat	plastid	48.04	45.16
PGSC0003DMT400006497	Potato	plasma membrane	44.12	44.78
Solyc03g120870.2.1	Tomato	extracellular, peroxisome, plasma membrane, plastid	45.59	44.71
AT1G79780.1	Thale cress	plasma membrane	39.71	43.32
Bra003530.1-P	Field mustard	plasma membrane	35.29	38.92
CDX82409	Canola	cytosol, peroxisome, plasma membrane	32.35	37.29
Bra001627.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.35	37.29
Bra027175.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.25	36.36
CDX67924	Canola	nucleus	36.27	35.92
AT3G16300.1	Thale cress	cytosol, peroxisome, plasma membrane	36.76	35.38
CDX75874	Canola	plasma membrane	35.29	35.29
CDY30156	Canola	cytosol, peroxisome, plasma membrane	38.24	31.71
CDX79414	Canola	mitochondrion	37.25	20.94

Protein Annotations

MapMan:35.1	EntrezGene:4324725	EMBL:AK073926	ProteinID:BAD87069.1	ProteinID:BAD87450.1	ProteinID:BAF06027.1
ProteinID:BAS74121.1	InterPro:CASP/CASPL	InterPro:CASP_dom	ProteinID:EEE55317.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	GO:GO:0051536
EnsemblPlantsGene:Os01g0725400	EnsemblPlants:Os01t0725400-01	PFAM:PF04535	PANTHER:PTHR11615	PANTHER:PTHR11615:SF118	UniProt:Q5JM57
TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI00004C287B	RefSeq:XP_015650345.1	SEG:seg	:

Description

Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os01t0725400-01)

Coordinates

chr1:+:30241954..30251103

Molecular Weight (calculated)

21772.0 Da

IEP (calculated)

9.572

GRAVY (calculated)

0.592

Length

204 amino acids

Sequence
(BLAST)

001: MGSIGNGRNG SEVGIQIPAM GNKEVLERPA IPRWPRLGVV MVATRAVALV MAVLSMALMI SAKQRGSLKI FGIEIPLYAN WSFSDSLEYL VGMSAVSAAY
101: CLAQLLLTAH KAVKNAPVVQ SRNYAWLLFT GDQIFAYAMM SAGSAAAAVA NLNRTGIRHT ALPNFCKPLP RFCDLSAASI ACAFLSCIFL AASAVIDVIW
201: LSNM

Best Arabidopsis Sequence Match ( AT1G79780.1 )
(BLAST)

001: MTSNGEGGEV VAKRRRKGIK ELVQVALRGG CLAASATAMA VMLTATEEGV ADIYGFKLTL SSNWSFSPSY QYVVGACAGT VLYSLLQLCL GVYRLVTGSP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP

Arabidopsis Description

CASP-like protein 3A2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.