CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, plasma membrane, mitochondrion

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane, plastid, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0725400-01	Rice	golgi, plasma membrane, vacuole	76.78	79.41
TraesCS3D01G284700.1	Wheat	plastid	70.14	71.5
TraesCS3B01G318800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	70.14	71.5
TraesCS3A01G284900.1	Wheat	plastid	70.14	71.5
GSMUA_Achr4P08280_001	Banana	peroxisome, plasma membrane, plastid	48.82	46.19
TraesCS3B01G317700.2	Wheat	plastid	47.39	46.08
PGSC0003DMT400006497	Potato	plasma membrane	43.13	45.27
VIT_09s0002g03780.t01	Wine grape	peroxisome, plastid, vacuole	45.02	45.24
KRH47229	Soybean	cytosol, peroxisome, plasma membrane	44.08	44.71
Solyc03g120870.2.1	Tomato	extracellular, peroxisome, plasma membrane, plastid	44.08	44.71
AT1G79780.1	Thale cress	plasma membrane	36.97	41.71
Bra003530.1-P	Field mustard	plasma membrane	33.18	37.84
Bra027175.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.44	37.8
CDX82409	Canola	cytosol, peroxisome, plasma membrane	31.28	37.29
Bra001627.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.28	37.29
CDX75874	Canola	plasma membrane	35.55	36.76
AT3G16300.1	Thale cress	cytosol, peroxisome, plasma membrane	36.49	36.32
CDX67924	Canola	nucleus	35.07	35.92
CDY30156	Canola	cytosol, peroxisome, plasma membrane	39.34	33.74
CDX79414	Canola	mitochondrion	35.55	20.66

Protein Annotations

MapMan:35.1	UniProt:A0A1B6Q5U8	EMBL:BE592160	InterPro:CASP/CASPL	InterPro:CASP_dom	ProteinID:EES01394.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
GO:GO:0016021	GO:GO:0051536	EnsemblPlants:KXG33291	ProteinID:KXG33291	ProteinID:KXG33291.1	PFAM:PF04535
PANTHER:PTHR11615	PANTHER:PTHR11615:SF118	EnsemblPlantsGene:SORBI_3003G281800	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI000217CB8D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:61668531..61673052

Molecular Weight (calculated)

22365.8 Da

IEP (calculated)

10.387

GRAVY (calculated)

0.653

Length

211 amino acids

Sequence
(BLAST)

001: MGSIGNGRSD SVVGIQMPPA GSKMVLEPEA LQVTTSPVPR WPRLGVVMVA TRAVAMVMAL LSMSLMVSSK QRGILTIFGI EIPLDANWSF SYSLQFLVAM
101: STASAAYSLA QLLLIAHKAV KKSPIVPSRR HAWLLFAGDQ VFSLAMMSAG SAAAAVANLN RTGIRHTALP NFCKPLPRFC DLSAVSIACA FLSCVFLAAS
201: AVIDVIWLSS P

Best Arabidopsis Sequence Match ( AT1G79780.1 )
(BLAST)

001: MTSNGEGGEV VAKRRRKGIK ELVQVALRGG CLAASATAMA VMLTATEEGV ADIYGFKLTL SSNWSFSPSY QYVVGACAGT VLYSLLQLCL GVYRLVTGSP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP

Arabidopsis Description

CASP-like protein 3A2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.