Factsheet for VIT_09s0002g03780.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole

Predictor Summary:

nucleus 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid, vacuole
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47229	Soybean	cytosol, peroxisome, plasma membrane	64.76	65.38
Solyc03g120870.2.1	Tomato	extracellular, peroxisome, plasma membrane, plastid	60.95	61.54
PGSC0003DMT400006497	Potato	plasma membrane	58.1	60.7
GSMUA_Achr4P08280_001	Banana	peroxisome, plasma membrane, plastid	56.19	52.91
Os01t0725400-01	Rice	golgi, plasma membrane, vacuole	49.05	50.49
TraesCS3B01G318800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	48.57	49.28
TraesCS3D01G284700.1	Wheat	plastid	47.62	48.31
TraesCS3A01G284900.1	Wheat	plastid	47.62	48.31
AT1G79780.1	Thale cress	plasma membrane	42.38	47.59
Bra027175.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.67	46.89
AT3G16300.1	Thale cress	cytosol, peroxisome, plasma membrane	46.19	45.75
KXG33291	Sorghum	mitochondrion, plasma membrane, plastid, vacuole	45.24	45.02
CDX82409	Canola	cytosol, peroxisome, plasma membrane	37.14	44.07
Bra001627.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.67	43.5
Bra003530.1-P	Field mustard	plasma membrane	38.1	43.24
CDX75874	Canola	plasma membrane	40.95	42.16
CDY30156	Canola	cytosol, peroxisome, plasma membrane	46.67	39.84
CDX67924	Canola	nucleus	39.05	39.81
TraesCS3B01G317700.2	Wheat	plastid	28.1	27.19
CDX79414	Canola	mitochondrion	38.1	22.04

Protein Annotations

EntrezGene:100267002	wikigene:100267002	MapMan:35.1	UniProt:A7P756	EMBL:AM486569	ProteinID:CAN71023
ProteinID:CAN71023.1	InterPro:CASP/CASPL	InterPro:CASP_dom	ProteinID:CCB59439	ProteinID:CCB59439.1	EMBL:EC952587
EMBL:FN596494	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	GO:GO:0016021	GO:GO:0051536	EntrezGene:LOC100267002	wikigene:LOC100267002	PFAM:PF04535
PANTHER:PTHR11615	PANTHER:PTHR11615:SF118	TIGRFAMs:TIGR01569	TMHMM:TMhelix	UniParc:UPI00015C858F	ArrayExpress:VIT_09s0002g03780
EnsemblPlantsGene:VIT_09s0002g03780	EnsemblPlants:VIT_09s0002g03780.t01	RefSeq:XP_002284038	RefSeq:XP_002284038.1	:	:

Description

CASP-like protein 3A1 [Source:UniProtKB/Swiss-Prot;Acc:A7P756]

Coordinates

chr9:+:3466267..3469237

Molecular Weight (calculated)

22498.5 Da

IEP (calculated)

9.863

GRAVY (calculated)

0.505

Length

210 amino acids

Sequence
(BLAST)

001: MNGLKTPPEI GIQLPEAKVA AETGTMSGPL VPPRSDRSVR RGTDVAHVVL RFVCLLTSVI ALSLMATAKE AASISIYGFL LPVSSKWSFS DSFEYLVGVS
101: AAVAAHALLQ LIISVSRLLR KSPVIPSRNH AWLIFAGDQA FAYAMLSAGS AASGVTNLNR TGIRHSPLPN FCKPLRSFCD HVAASIAFTF FSCFLLATSA
201: ILDVIWLSKY

Best Arabidopsis Sequence Match ( AT3G16300.1 )
(BLAST)

001: MAKAAEQKQN PTVASAEAKL DIRDVVNTAI TYGEDNRHGG GKRNDVAMFV LRAMCMAVST VAVTLMVTAR ETSMTTLYGF EFQLHAVWSL SDSLIYLVVV
101: SSATVLYSLI QLIISGTRLM RKSPVIPTRT QAWFCFVADQ IIGYAMVSGG SAALGVTNMN RTGIRHMPLP NFCKSLGFFC DHLAGSIVFA LFAFLLLAAS
201: SLLDVLHLSR HR

Arabidopsis Description

CASP-like protein 3A1 [Source:UniProtKB/Swiss-Prot;Acc:Q3EB59]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.