Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G318800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 57.6 | 60.39 |
| Os01t0725400-01 | Rice | golgi, plasma membrane, vacuole | 45.16 | 48.04 |
| KXG33291 | Sorghum | mitochondrion, plasma membrane, plastid, vacuole | 46.08 | 47.39 |
| GSMUA_Achr4P08280_001 | Banana | peroxisome, plasma membrane, plastid | 30.88 | 30.04 |
| VIT_09s0002g03780.t01 | Wine grape | peroxisome, plastid, vacuole | 27.19 | 28.1 |
| PGSC0003DMT400006497 | Potato | plasma membrane | 25.35 | 27.36 |
| Solyc03g120870.2.1 | Tomato | extracellular, peroxisome, plasma membrane, plastid | 25.81 | 26.92 |
| KRH47229 | Soybean | cytosol, peroxisome, plasma membrane | 23.96 | 25.0 |
| CDX75874 | Canola | plasma membrane | 23.04 | 24.51 |
| Bra027175.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 23.04 | 23.92 |
| AT3G16300.1 | Thale cress | cytosol, peroxisome, plasma membrane | 23.04 | 23.58 |
| AT1G79780.1 | Thale cress | plasma membrane | 19.82 | 22.99 |
| Bra001627.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 17.97 | 22.03 |
| CDY30156 | Canola | cytosol, peroxisome, plasma membrane | 24.42 | 21.54 |
| CDX82409 | Canola | cytosol, peroxisome, plasma membrane | 17.51 | 21.47 |
| Bra003530.1-P | Field mustard | plasma membrane | 17.97 | 21.08 |
| CDX67924 | Canola | nucleus | 18.89 | 19.9 |
| CDX79414 | Canola | mitochondrion | 19.82 | 11.85 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G317700.2 | EnsemblPlantsGene:TraesCS3B01G317700 | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF118 | PFAM:PF04535 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:511383922..511388369
Molecular Weight (calculated)
24013.1 Da
IEP (calculated)
10.192
GRAVY (calculated)
-0.062
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFANGQNG SELGIQMPAM GSSAVLEPPT TSVTPRCPRL DMAMVATRAA ALVMALLSMS LMVSARQRGN LIIFGIEIPL YAKWSLSDSL KSLVGISAAA
101: AAYSLAQLLS IAYKALKKVP AVPSRRYAWM LLAGDQEYAT LYSEATFREQ IRRSCSMSSQ LTYNINRQGN DDRWNLWLQT QRKVHAFFKM TEPYFAWHEI
201: GRTSGGAWSV RRDCKTA
101: AAYSLAQLLS IAYKALKKVP AVPSRRYAWM LLAGDQEYAT LYSEATFREQ IRRSCSMSSQ LTYNINRQGN DDRWNLWLQT QRKVHAFFKM TEPYFAWHEI
201: GRTSGGAWSV RRDCKTA
001: MTSNGEGGEV VAKRRRKGIK ELVQVALRGG CLAASATAMA VMLTATEEGV ADIYGFKLTL SSNWSFSPSY QYVVGACAGT VLYSLLQLCL GVYRLVTGSP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP
101: ITPSRFQAWL CFTSDQLFCY LMMSAGSAGS GVTNLNKTGI RHTPLPDFCK TLSSFCNHVA LSLLLVFLSF IFLASSSFFT VLVLSTP
Arabidopsis Description
CASP-like protein 3A2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.